KEGG   Variovorax paradoxus S110: Vapar_0515
Entry
Vapar_0515        CDS       T00916                                 
Name
(GenBank) type IV / VI secretion system protein, DotU family
  KO
K11892  type VI secretion system protein ImpK
Organism
vap  Variovorax paradoxus S110
Pathway
vap03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vap00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Vapar_0515
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vap02044]
    Vapar_0515
Secretion system [BR:vap02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Vapar_0515
SSDB
Motif
Pfam: DotU OmpA DEC-1_N
Other DBs
NCBI-ProteinID: ACS17178
UniProt: C5CK80
LinkDB
Position
1:564578..565906
AA seq 442 aa
MTTPDPFAAFESERTVIKPKPRTPAGTPPAPAPAPFFGGADPTPAVDVGEIGLLNPLVSA
AGKLLVLIGKLRNLVQPPNVPALRASTADAVNQFDAAARRAGASNESVLAARYVLCTALD
EAVANTPWGVQAGWNKQSLLVQFHNETWGGEKVFQLLAKLAQDVPTHRQLLELIYSVLAL
GFEGRYRVVDNGRAQLDSVRQRLADLIAKDRPPLEAELSPHWRGQGAGTVRLRESLPLWV
FAAGFALLLALAWFGLRLTLNYRSDTTYAAVSGLRVPNLQIAPPAAPAKSPRLARFLEPE
IKQGLVTVTDEADRSVVRLRGDSFFGSGSAEPMAASLPVLRRIGQALAEVKGEVLITGHS
DNQPIRSLRYPSNWHLSAARADAVKGALTTLVEPARMRSDGKADAEPVAANDTPANRARN
RRVDIVLLSEPDRVAAAAGVTK
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgacaacacccgatcccttcgccgccttcgagtcggagcgcacggtcatcaagcccaag
ccgcgcacgccggccggcacgccgcccgcgccggctcccgcaccgttcttcggcggcgct
gatccgacgccggccgtcgacgtcggcgagatcggcctgctcaatccgctggtctcggcc
gcgggcaagctgctggtgctgatcggaaagctgcgcaacctggtgcagccgcccaacgtg
ccggccctgcgcgcctccaccgccgacgcggtgaaccagttcgatgccgccgcgcgccgc
gccggcgccagcaacgaatcggtgctggccgcacgctacgtgctgtgcaccgcgctggat
gaagccgtggccaacacgccctggggcgtgcaggccggctggaacaagcagagcctcttg
gtgcagttccacaacgagacctggggcggcgagaaggtgttccagctgctcgccaagctc
gcgcaggacgtgcccacgcaccgccagctgctggagctgatctacagcgtgctcgcgctc
ggcttcgaaggccgctaccgcgtggtcgacaacggccgcgcgcagctcgattcggtgcgc
cagcgcctggccgacctgatcgccaaggatcgcccgccgctcgaagccgagctttcgccg
cactggcgcgggcagggcgcgggcacggtgcggctgcgcgaatcgctgccgctgtgggtg
ttcgcggccggcttcgcgctgctgctcgcgctggcctggtttggcctgcggctcacgctc
aactaccgctccgacaccacctatgccgcggtgtcgggcctgcgcgtgcccaacctccag
atcgcgccgcctgccgcgccggccaagtcgccgcggctcgcgcgctttctcgagcccgag
atcaagcagggcctggtcaccgtgaccgacgaggccgaccgcagcgtggtgcggctgcgc
ggcgattccttcttcggctccggcagcgccgagcccatggcggcctcgctgccggtgctg
cgccgcatcggccaggcgctggccgaggtgaagggcgaggtgctgatcaccggccactcc
gacaaccagccgatccgctcgctgcgctatccctccaactggcacctgtcggcggcgcgc
gccgatgcggtgaaaggcgcactcaccacgctggtcgagccggcgcgcatgcgctccgac
ggcaaggccgacgccgagcccgtggccgccaacgacacgccggccaaccgcgcgcgcaac
cggcgggtggacatcgtgctcttgtccgagccggaccgcgtggctgccgcggcgggagtg
acgaaatga

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