Variovorax paradoxus S110: Vapar_0516 Help Entry Vapar_0516        CDS       T00916                                  Name (GenBank) type VI secretion protein IcmF   KO K11891   type VI secretion system protein ImpL Organism vap  Variovorax paradoxus S110 Pathway vap03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:vap00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     Vapar_0516  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:vap02044]     Vapar_0516 Secretion system [BR:vap02044]  Type VI secretion system   Imp/Vas secretion system core components    Vapar_0516 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF7269 Motif Other DBs NCBI-ProteinID:  ACS17179 UniProt:  C5CK81 LinkDB All DBs Position 1:565903..569502 Genome browser AA seq 1199 aa AA seqDB search MIKKIFGFLFSPLLLTLLALVIVALLIWWIGPLVKIGAWVPLESELARALLIGAIVLVVV LRAIYRRWRARRASQHLTDGLMKAPAAKADAPVNGEQKILDTRFSEAVATLKQMRLHAAG KKPGWRDWLSISGGSYLYDLPWYVFIGAPGAGKTTALVNSGLSFPLAEKFGPGAIRGVGG TRNCDWWFTDEAVLIDTAGRYTTQDSHQSEDKSAWEGFLGLLKKARPRRPLNGVFLTVSV ADLLSQGPEQRTQLAASIRARLLELDAKLTTRLPVYVLVTKSDLLYGFTDYFDDLGKEQR AQVFGFTLAADENVQADEKGLSTAFHREFALLHNRVNDGLIARMQRETDGTRRAAIFGFP AQFGSIGSMLSDLLDQVFTGSRFAQPPWVRGVYFTSGTQEGSPIDRVMGSLARSFGIERA MLAPQKSSGRSYFLTALLREVVFPEQRLAGANVKLERRRHALRMAGVAAMTLVTLALLAG WGYSTLQNLNYLKSVEARVEPARQTLAALPSRVQNLVEVAPVLQGLRDIWKTPDNRQGDE PLSMTLGLYQGDKLDAAAMLTHQRALNDAFLPQIAKRIEDQLRTAQKDNLEYTYEALKSY LMLYQPEHFDAEALKAWITLDWARSLDRGIPEDQRQALEDQLDVLIAQGPPRSPLKMDEN LVRSVRAVLASYPLEQRVFSRLKRQRATKDIPAFSIATAAGPSAPLVFERISGKPLTEGV PGMFTYDGYHKRFQNEVTVLTGLLAQEDPWVLGQDRSAADRMRDVAALGALTDRVRRLYL AEYVKVWEALLADVRLIRASGLEKNIEAARILSGVGSPLANFLRAVVKETTLIPADQPKD VVSKATATVASTRKGLEDLFGGDPNKAVASGKRIESIVDDRFEPLRRLVTAAGPNQPAPI DDALKLFNEVYVYLTAVDTAVKGRTSPPPGDVAGKLKSDAGRLPEPVRTMVENLSQSGAA QAQVAERGNLSQDLRPVTDFCNRAIAGRYPFVGSSKRDVLPEDFGQMFGAGGLMDEFFQK RLAALVDTSTKPWRYKPVAERGAVTTQALAQFERAARIKDIFFRGGGRGPSMRLDFKPVE MDAGITQFILDVDGQLVKYAHGPVVPMAVQWPGPKGSYQVRIQVSPPSATGSSGAAVDGP WALFRALDDGQLEAGDAPEKFFITFQIGARKTRFEVTTNSVQHPIRLKELREFSCPEGL NT seq 3600 nt NT seq  +upstreamnt  +downstreamnt atgatcaagaaaatcttcggcttcctgttcagcccgctgctgctgacgctgctggcgctg gtcatcgtcgcgctcctgatctggtggatcggcccgctggtgaagatcggcgcgtgggtg ccgctcgaaagcgagctcgcacgcgcgctgctgatcggggccatcgtgctcgtcgtggtg ctgcgcgcgatctaccgccgctggcgcgcgcgccgtgcgagccagcacctgaccgacggc ctcatgaaggcgcccgccgccaaggccgatgcgccggtcaacggcgagcagaagatcctg gacacgcgcttcagcgaagccgtggccacgctcaagcagatgcgtctgcatgccgcgggc aagaagcccggctggcgcgactggctctccatttccggcggcagctacctgtacgacctg ccttggtacgtgttcatcggcgcgcctggcgcgggcaagaccacggcgctggtcaactcg ggcctctcgttcccgctggccgagaagttcggccccggcgcgatccgcggcgtgggtggc acgcgcaactgcgactggtggttcaccgacgaggccgtgctcatcgacaccgccggccgc tacaccacgcaggacagccaccagtcggaagacaagagcgcgtgggagggcttcctcggc ctgctcaagaaggcgcgtccgcgccggccgctcaacggcgtgttcctcacggtgagcgtg gccgacctgctgagccagggcccggagcagcgcacgcagctggccgcgtccatccgcgcg cggctgctcgagctcgatgcgaagctcaccacgcggctgccggtgtatgtgctggtcacc aagagcgacctgctctatggcttcaccgactacttcgacgacctcggcaaggagcagcgc gcgcaggtcttcggcttcacgctggcggccgacgagaacgtgcaggccgacgagaagggc ctgtccaccgccttccaccgcgagtttgcgctgctgcacaaccgcgtcaacgacgggctc atcgcacgcatgcagcgcgagaccgacggcacgcggcgcgcggcgatcttcggctttccg gcgcagttcggctccatcggctcgatgctgtcggacctgctcgaccaggtgttcaccggc tcgcgcttcgcgcagccgccgtgggtgcgcggcgtgtacttcaccagcggcacgcaggaa ggcagcccgatcgaccgcgtgatgggcagcctcgcgcgcagcttcggcatcgagcgcgcg atgctcgcgccgcagaagtccagcggccgcagctactttctcactgcgctgctgcgcgag gtggtgttccccgagcagcgcctggccggcgccaacgtgaagctggagcgccgtcgccat gcgctgcgcatggcgggcgtggcggccatgacgctggtcacgctcgcgctgctcgcgggc tggggctacagcacgctgcagaacctcaactacctgaagtcggtcgaggcgcgcgtcgag cccgcgcgccagaccctcgcggccctgccttcgcgggtgcagaacctggtcgaggtggcg ccggtgctgcagggcctgcgcgacatctggaagacacccgacaaccgccagggcgacgag ccgctgtcgatgacgctcggcctctaccagggcgacaagctcgacgccgccgccatgctc acgcaccagcgtgcgctcaacgacgccttcctgccgcagatcgccaagcgcatcgaggac cagctgcgcaccgcgcagaaggacaacctcgaatacacctacgaggcgctcaagagctac ctcatgctctaccagcccgagcatttcgatgccgaggcgctcaaggcctggatcacgctc gactgggcgcgcagcctggaccgcggcattcccgaagaccagcgccaggcgctcgaagac cagctcgacgtgctcattgcccagggcccgccacgctcgccgctcaagatggacgagaac ctggtgcgcagcgtgcgtgccgtgctcgcgagctatccgctggagcagcgcgtgttcagc cgcctgaagcgccagcgcgccaccaaggacattccggccttcagcattgccaccgccgcc ggcccctcggcgccgctggtgttcgagcgcatcagcggcaagccgctgaccgaaggcgtg ccgggcatgttcacctacgacggttatcacaagcgcttccagaatgaagtgacggtgctc accggcctgctcgcgcaggaagacccgtgggtgctcgggcaggaccgcagcgctgccgac cgcatgcgcgacgtggccgcgctcggcgcgctgaccgaccgcgtgcgccgcctctatctt gcggagtacgtcaaggtctgggaggcgctcctggccgacgtgcggctgatccgcgccagc gggctcgagaagaacatcgaggccgcgcgcattctctcgggcgtgggctcgccgcttgcg aacttcttgcgcgcggtggtgaaggagaccacgctcattccggccgaccagcccaaggac gtggtgagcaaggccaccgccaccgtcgcgagcacccgcaagggcctggaagacctgttc ggcggcgaccccaacaaggccgtggccagcggcaagcgcatcgagagcatcgtggacgac cgcttcgagccgctgcgccgcctggtcaccgcggccggaccgaaccagcccgcgccaatc gacgatgcgctcaagctcttcaacgaggtgtatgtgtacctcacggccgtcgacaccgcc gtgaaggggcgcacctcgccgccgcccggcgacgtggccggcaagctcaagtccgacgcg ggccgcctgcccgagccagtgcgcaccatggtggagaacctgagccagtcgggcgcggcg caggcccaggtggccgagcgcggcaacctgagccaggacctgcgtcccgtgaccgacttc tgcaaccgcgccatcgcgggccgctaccccttcgtgggcagcagcaagcgcgacgtgctg cccgaggacttcggccagatgttcggcgccggcggcctgatggacgagttcttccagaag cggctggccgcgctggtcgacaccagcaccaagccctggcgctacaagcccgtggccgaa cgcggcgccgtcaccacgcaggcgctggcgcagttcgagcgggccgcgcgcatcaaggac atcttcttccgcggcggcggccgaggcccgtcgatgcggctggacttcaagccggtggag atggatgcgggcatcacgcaattcatcctcgacgtcgacggccagctcgtgaagtacgcg cacggcccggtggtccccatggccgtgcagtggcccggcccgaagggcagctaccaggtg cgcatccaggtgagcccgccttcggccaccggcagttcgggcgccgcggtcgatgggcca tgggcgctgttccgcgcgctcgacgacggccagctcgaagcgggcgatgcgcccgagaag ttcttcatcaccttccagatcggcgcgcgcaagacgcgcttcgaagtgacgacgaacagc gtgcagcatccgatccgcttgaaggagctgcgcgagttctcctgtccggaggggctgtga

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