Variovorax paradoxus S110: Vapar_0532
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Entry
Vapar_0532 CDS
T00916
Name
(GenBank) pentapeptide repeat protein
Organism
vap
Variovorax paradoxus S110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2169
Pentapeptide
Pentapeptide_4
Pentapeptide_3
Motif
Other DBs
NCBI-ProteinID:
ACS17195
UniProt:
C5CK97
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Position
1:590557..593169
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AA seq
870 aa
AA seq
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MQIIKPQTLGLSFRPMAFRKRFGLSVSGYLHVPFAQPAQGCLWGEQSMWNFLGAEMGVPL
IDEGIAKLTPEFLVHGKAFAAPERPEAVAVRARLGGTSKTLLAFGERYWDGDAPSAPAPM
QPLALDWPNAYGGADFAENPSGRGRQATDRIRWLPALEYPGDRLRRPDQAVAPAAFTPLD
VLHPQRAALRGTYDANWLKEHAPGYAPDLNWQHFNMAPRDQWIDAPLRGDETYELDHMHP
ERPHIEGRLPGLRVRAFAHYRMGEGDSAVFKLREIPMRLTTVWFFPAAQRMVLVFHGLAE
TAEDDASDIHDLLGAVERIDPAEARTGAHYLSVLEKRTRGRDAALEALNDGDLQPEGLDT
ADPSLEALQAVMKSQGLQEAAQYRRAQVEVQLARDFLQSKGRDPDALGVRLAPREKPPTA
AEMPAYLKKLREQMDAQRWAALDDAATHAETAIAFVKKHKPAAEKLQHRGPPLFSAKQQL
AELESAHRTAGKPFDRARIGTALWRMQNSLHVDYLQTAHLQAAAVPLAGEAAAASRREVA
FLLRSHLKRWPGIDLTGADLSNLDLRGVDFTGAWLESANLRNANLSGAKLQATVLAHADL
RGAIAIGADFRAANLGGAECAQAVFDNANLQGAILGGTRLGLAQLRGARLAQAQWLDSVW
AGADASAIVAPGMLFYKLDMSGARFVEAVLANCSFIECNLQGADFSGADLGAASLVGCNA
ANARFVGARMAGAVVVKTTRLAGADFTGAMLVNANLGECDLSGARLARANLAGANFGMGL
LSDSDLRLANAKGALFRKAGLQRARLAGANFHDAILQSADLRGADLREANLFGADLSRVR
LDGDAKFDGALLERARIHPRLTPEQHAGGR
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcatcaagccccagacactcgggctctcgttcaggcccatggcgttccgcaag
cggttcggcctgtccgtgtcgggctacctgcacgtccctttcgcgcagccggcgcagggc
tgtctctggggcgagcagtcgatgtggaattttctcggcgccgagatgggggtgcccttg
atcgacgagggcatcgccaagctgacgcccgagtttctcgtgcatggcaaggccttcgcg
gcgcccgagcgccccgaggccgtcgcggtgcgcgcccggcttggcggcacctcgaagacc
ctgctggcattcggggagcgctactgggacggcgacgcgccgagcgcgccggcgccgatg
cagccgctggccctggactggcccaatgcctatggcggcgcggacttcgccgagaacccg
tcggggcgcggccgccaggccaccgaccgcattcgatggctgcccgccctcgaatacccg
ggcgaccggctgcgcaggccggaccaggcggtggcgcccgcggccttcacgccgctcgac
gtgctgcatccgcagcgggcggcgctgcgcggcacctacgacgccaactggctgaaggag
catgcacccggctacgcgcccgacctgaactggcagcacttcaacatggcgccgcgcgac
cagtggatcgatgcgcccttgcgcggcgacgagacctacgagctcgatcacatgcatccc
gagcgcccgcacatcgaaggccggctgccaggtcttcgcgtgcgtgcgttcgcgcactac
cggatgggcgagggggacagcgcggtcttcaagctgcgtgaaattccgatgcggctgacg
acggtgtggttcttcccggcggcgcagcggatggttctggtcttccacggcctggctgaa
accgccgaggacgacgcatccgacatccacgatctgctcggggcggtcgagcgcatcgat
ccggccgaggcgcgcactggcgcgcactacctgtcggtgctcgagaagcgcacgcgcggc
cgcgacgcggcgctcgaggccctgaacgacggcgatctgcagcccgagggcctggacacc
gccgatccctcgctggaagccctgcaagccgtcatgaagtcgcaaggcctgcaggaggcg
gcgcagtaccgccgcgcgcaagtcgaggtgcagttggcgcgcgacttcctgcagtcgaag
ggcagggaccccgatgcgctcggcgtccggctggcgccccgcgaaaagccgccgaccgcc
gccgagatgccggcctacctgaagaagctgcgcgagcagatggacgcgcagcgttgggcg
gcgctggacgacgcggcaacgcacgccgaaaccgcgatcgcctttgtcaaaaagcacaaa
cccgccgctgaaaagctccagcaccgcggtccgccgctcttcagcgcgaagcagcagctc
gcggaactggaaagcgcgcaccgtactgccggcaagcccttcgaccgtgcgcgcatcggt
accgcgctctggcgcatgcagaactcgctgcacgtcgactacctgcagacggcgcacctg
caggccgccgccgttccccttgcgggcgaagccgcggcggcgagccgccgcgaggtggcg
ttcttgctgcgaagccatctgaagcggtggccgggcatcgacctgacgggcgcggacctg
tcgaacctcgatctgcgcggcgtcgatttcaccggcgcctggctggagagcgcgaacctg
cgcaacgccaacctgtcgggcgcgaagctgcaggccacggtgctggcccacgccgacctg
cgtggcgcgatcgccatcggcgccgacttccgtgcggccaacctcggcggcgccgaatgc
gcacaggcggtgttcgacaacgcgaacctgcaaggcgccatcctcggtggcacccggctc
ggcctggcccagctgcgcggcgcgcggctggcgcaggctcaatggctcgacagcgtctgg
gccggagccgacgcctcggcgatcgtggcgccgggcatgctgttctacaagctcgacatg
agcggggcgcggttcgtcgaagccgtcctggccaactgcagcttcatcgaatgcaacctg
cagggcgcagacttcagcggcgcggatctcggcgcggccagcctggtcggctgcaatgcc
gcgaacgcccgcttcgtcggcgcccggatggctggcgcggtggtggtcaagaccacacgc
ctggcgggagccgatttcaccggcgccatgctggtcaatgccaacctgggcgaatgcgac
ctgagcggcgcgcggctggcgcgggcgaacctcgcgggggcgaacttcggcatgggcctt
ctttcggacagcgacctgcgcctggcgaacgccaaaggggcgctgtttcgcaaggcgggg
ctgcaacgggcccgtctcgcgggcgccaacttccacgatgccatcctgcagtccgccgac
ctgcgcggcgcggatctgcgcgaggccaacctcttcggcgccgacctgtcccgcgtgcgg
ctcgatggcgacgcgaagttcgacggggcgttgctcgaacgtgcgcgcatccacccacgg
ctgacgccggaacagcatgcgggagggcgttga
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