KEGG   Variovorax paradoxus S110: Vapar_0548
Entry
Vapar_0548        CDS       T00916                                 
Name
(GenBank) protein of unknown function DUF796
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
vap  Variovorax paradoxus S110
Pathway
vap03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vap00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Vapar_0548
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vap02044]
    Vapar_0548
Secretion system [BR:vap02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Vapar_0548
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: ACS17211
UniProt: C5CKB3
LinkDB
Position
1:complement(607989..608471)
AA seq 160 aa
MAADMFLKLEGVDGESKDDSHKKEIDVLSWSWGASQSGTGHVGGGSGAGKVSVQDLSVTK
YVDSSSHLLLLDCCNGQHIKKGTLVVRKAGATPLEYIKLTMEDIIVSNIHTGGSGGEDRL
TETITLNFSKFKYEYTPQKADGSGDGTKETGWDIAANKKV
NT seq 483 nt   +upstreamnt  +downstreamnt
atggctgcagacatgtttttgaagctcgagggcgtcgacggtgaatccaaggacgattcg
cacaagaaggagatcgacgttctctcctggagctggggtgccagccaatcgggcaccggc
cacgtgggcggcggctcgggcgcaggcaaggtgagcgtgcaagacctctcggtcaccaag
tacgtggactcctcctcgcacctgctgctgctcgactgctgcaatggccagcacatcaag
aagggcacgctggtggtccgcaaggccggggccacgccgctcgagtacatcaagctcacg
atggaagacatcatcgtcagcaacatccacaccggcggcagcggcggcgaagaccgcctg
accgagaccatcacgctgaacttctcgaagttcaagtacgagtacacgccgcagaaggcc
gacggttccggcgacggcaccaaggaaaccggctgggacatcgccgccaacaagaaggtc
tga

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