Variovorax paradoxus S110: Vapar_0821
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Entry
Vapar_0821 CDS
T00916
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_0821
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_0821
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_0821
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Vapar_0821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
ACS17474
UniProt:
C5CMH3
LinkDB
All DBs
Position
1:904004..905110
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AA seq
368 aa
AA seq
DB search
MRPLRIGIIGSWSGPYAAGGRQFDAGMSVWLAAHNQRIAGRPVELLRRDVPGSAPEQARR
HAQDLVESERVDLLAGLDFSSNAYAVGAVATQAKVPLLVMNAASSGITARCPFAVRVSFT
IAQVTMPLARWAIQQGLRDVCTVVADYASGVDAESAFVSAVTAGGGRIGAMLRVPLNTLD
YSAYMLRLRELRPQAVFFFLPSGQMPATFLKFWRDRGMADTGIRLLATGDATDDHYLEGI
GELAEGLVTSHHYSFAHESAANRRFTAAFETEYGSHLRPGYFAVAAHDALAAADAAMSSP
AARGGLNGERLVDAFRGLQLESPRGPIEIDAHTRDIVQAVYIRRTERLDGRWINREFERF
ERVREPAL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgcggccgctgcgcatcggcatcatcggttcctggtcgggcccttatgcggcgggcggg
cgccagttcgatgccggcatgtcggtctggctcgcggcccacaaccagcgcatcgcggga
cgcccggtcgaactgctgcgccgcgacgtgcccggcagcgcgcccgagcaggcgcggcgc
catgcgcaggacctggtggagagcgagcgtgtcgacctgctcgcggggctggacttcagc
tccaacgcctacgccgtcggcgccgtggccacgcaggccaaggtgccgctgctggtgatg
aatgcggcttcctcgggcatcacggcgcgctgcccgttcgcggtgcgcgtgtccttcacc
atcgcgcaggtcacgatgccgctggcgcgctgggcgatccagcaagggctgcgcgatgtc
tgcaccgtggtggccgactatgcctcgggcgtcgatgccgaaagcgccttcgtctcggcc
gtcaccgccggcggcggccgcatcggcgcgatgctgcgcgtgccgctcaacaccctggac
tattcggcctacatgctgcggctgcgcgagctcaggccgcaggcggtgttcttcttcctg
ccttcgggccagatgcccgccaccttcctcaagttctggcgcgaccgcggcatggccgac
accggcatccgcctgctcgcgaccggcgacgccaccgacgaccactacctcgaaggcatc
ggcgagctggccgagggcctcgtgaccagccaccactattcgtttgcccacgaatcggcg
gccaaccgccgcttcacggccgccttcgagaccgagtacggcagccacctgcggcccggc
tatttcgcggtggcggcgcacgatgcgctcgcggcggccgatgccgcgatgagctcgccg
gccgcgcgcggcggcctgaatggcgaacggctggtggacgctttccggggcctccagctc
gagagcccgcgcggcccgatcgagatcgacgcccacacgcgcgacatcgtgcaggccgtc
tacatccgccgcactgaaaggctcgacgggcgctggatcaaccgcgagttcgaacgcttc
gaacgggtgcgcgagccggcgctgtga
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