Variovorax paradoxus S110: Vapar_0899
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Entry
Vapar_0899 CDS
T00916
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00300
Lysine biosynthesis
vap00470
D-Amino acid metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01230
Biosynthesis of amino acids
Module
vap_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Vapar_0899
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Vapar_0899
Enzymes [BR:
vap01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Vapar_0899
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Hexokinase_2
Motif
Other DBs
NCBI-ProteinID:
ACS17550
UniProt:
C5CND4
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All DBs
Position
1:988979..989863
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AA seq
294 aa
AA seq
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MRIRFTKMQGAGNDFVVLDETRGTLGLTAAQYRFLADRHFGVGADQILTVRPPSKGAAEG
VDFQYVIHNADGGEVEQCGNGARCFMRFVREHHLTDKDTVRVETLAGIIEPRMGADGRVT
VDMGPPIFEPARVPFDTAGLDPQPTGSWHTWHLALGTHADSAIVSVAVLSMGNPHAVQVV
DNVDTAPVARQGPLIEHHPRFAQRVNAGFMQVVDRSHIKLRVFERGAGETLACGTGACAA
VVAGIRLGLLERRVDVQTHGGVLTIGWEGEGHPVLMTGPATTVFEGDIEVPELP
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatccgctttaccaagatgcagggtgccggcaacgatttcgtcgtgctggacgag
acgcgcggcacgctgggcctcacggccgcgcagtaccgcttcctggccgaccgccatttc
ggcgtcggcgccgaccagatcctcacggtgcggccgccctccaagggcgcggccgagggg
gtcgatttccagtacgtgatccacaacgccgacggcggcgaggtggagcagtgcggcaac
ggcgcgcgctgcttcatgcgcttcgtgcgcgagcaccacctgaccgacaaggacacggtg
cgcgtcgaaacgctggccggcatcatcgagccgcgcatgggcgcagacggccgcgtcacg
gtcgacatggggccgcccatcttcgagcccgcgcgcgtgcccttcgacaccgccggcctc
gatccgcagcccacggggtcgtggcacacctggcacctggccctcggcacgcatgccgac
tcggccatcgtgtcggtcgcggtgctgtcgatgggcaatccgcatgcggtgcaggtggtc
gacaacgtcgacaccgcgcccgtggcccggcagggcccgctgatcgagcaccacccgcgc
tttgcgcagcgcgtgaacgccggcttcatgcaggtggtcgaccgctcgcacatcaagctg
cgcgtgttcgagcgcggcgccggcgaaacgctggcctgcggcaccggcgcctgcgcggcg
gtggtggcgggcatccggctcggcctgctggagcgccgggtcgacgtgcagacgcatggc
ggcgtgctcacgatcggctgggaaggcgagggccatccggtgctcatgaccggcccggcc
accacggttttcgagggagacatcgaggtgcccgagctgccatga
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