KEGG   Variovorax paradoxus S110: Vapar_0899
Entry
Vapar_0899        CDS       T00916                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
vap  Variovorax paradoxus S110
Pathway
vap00300  Lysine biosynthesis
vap00470  D-Amino acid metabolism
vap01100  Metabolic pathways
vap01110  Biosynthesis of secondary metabolites
vap01120  Microbial metabolism in diverse environments
vap01230  Biosynthesis of amino acids
Module
vap_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vap00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Vapar_0899
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Vapar_0899
Enzymes [BR:vap01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     Vapar_0899
SSDB
Motif
Pfam: DAP_epimerase Hexokinase_2
Other DBs
NCBI-ProteinID: ACS17550
UniProt: C5CND4
LinkDB
Position
1:988979..989863
AA seq 294 aa
MRIRFTKMQGAGNDFVVLDETRGTLGLTAAQYRFLADRHFGVGADQILTVRPPSKGAAEG
VDFQYVIHNADGGEVEQCGNGARCFMRFVREHHLTDKDTVRVETLAGIIEPRMGADGRVT
VDMGPPIFEPARVPFDTAGLDPQPTGSWHTWHLALGTHADSAIVSVAVLSMGNPHAVQVV
DNVDTAPVARQGPLIEHHPRFAQRVNAGFMQVVDRSHIKLRVFERGAGETLACGTGACAA
VVAGIRLGLLERRVDVQTHGGVLTIGWEGEGHPVLMTGPATTVFEGDIEVPELP
NT seq 885 nt   +upstreamnt  +downstreamnt
atgcgaatccgctttaccaagatgcagggtgccggcaacgatttcgtcgtgctggacgag
acgcgcggcacgctgggcctcacggccgcgcagtaccgcttcctggccgaccgccatttc
ggcgtcggcgccgaccagatcctcacggtgcggccgccctccaagggcgcggccgagggg
gtcgatttccagtacgtgatccacaacgccgacggcggcgaggtggagcagtgcggcaac
ggcgcgcgctgcttcatgcgcttcgtgcgcgagcaccacctgaccgacaaggacacggtg
cgcgtcgaaacgctggccggcatcatcgagccgcgcatgggcgcagacggccgcgtcacg
gtcgacatggggccgcccatcttcgagcccgcgcgcgtgcccttcgacaccgccggcctc
gatccgcagcccacggggtcgtggcacacctggcacctggccctcggcacgcatgccgac
tcggccatcgtgtcggtcgcggtgctgtcgatgggcaatccgcatgcggtgcaggtggtc
gacaacgtcgacaccgcgcccgtggcccggcagggcccgctgatcgagcaccacccgcgc
tttgcgcagcgcgtgaacgccggcttcatgcaggtggtcgaccgctcgcacatcaagctg
cgcgtgttcgagcgcggcgccggcgaaacgctggcctgcggcaccggcgcctgcgcggcg
gtggtggcgggcatccggctcggcctgctggagcgccgggtcgacgtgcagacgcatggc
ggcgtgctcacgatcggctgggaaggcgagggccatccggtgctcatgaccggcccggcc
accacggttttcgagggagacatcgaggtgcccgagctgccatga

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