Variovorax paradoxus S110: Vapar_0915
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Entry
Vapar_0915 CDS
T00916
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00300
Lysine biosynthesis
vap00550
Peptidoglycan biosynthesis
vap01100
Metabolic pathways
vap01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Vapar_0915
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Vapar_0915
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Vapar_0915
Enzymes [BR:
vap01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Vapar_0915
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ACS17566
UniProt:
C5CNF0
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All DBs
Position
1:1006569..1007984
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AA seq
471 aa
AA seq
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MMFTLAQAQQWIPGARLVGDGATAIARVHTDTRTLAEGDLFVALKGERFDANEFLADAKA
RGAVAAIAHGGLEAAGLAGLEVPDSLAALGALGAGWRAQFDLPLIAVTGSNGKTTVTQMI
AAVLVAFRGDRALATAGNFNNEIGVPLTLLRLRAKHQHAVVELGMNHPGEIARLAAIARP
TVALVNNAQREHLEFMATVEAVALENGAVFSFVPEDGTAVFPHGDEFAPLWNDMAHDGAT
RRCMTFGEHEDADISLVAAEWQQGAWQVRIRTPLGDFDAQLHIAGRHNVVNALAATACAL
ATGIPPETIARGLSAFEPVKGRSKASAVLLPGGHSLTLVDDSYNANPDSVRAAIDVLAAL
PGPRLLVLGDMGEVGNRAPEFHAEVGDWARQRGIEAVYALGAETAHSIAAFDGGDNGRHF
ADIEALGAAVLARLPQVGSVLVKGSRFMKMERVVQAIEQSRQQQKEAGHDA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcacgctggcccaggcgcagcaatggattccgggcgcgcgcctggtgggcgac
ggcgcaacggccattgcccgcgtccataccgacacccgcacgctcgcggaaggcgacctg
ttcgtggcgctcaagggcgaacgcttcgacgccaatgaattcctggccgatgccaaggcg
cgcggcgccgtcgccgccattgcgcacggcggcctcgaggcggccggcctggcagggctc
gaggtgcccgattcgctggccgcgctcggcgcgctcggcgccggctggcgcgcgcagttc
gatctgccgctgatcgccgtgaccggcagcaacggcaagacgaccgtcacgcagatgatc
gcggccgtgctggtcgccttcaggggcgatcgcgcgctcgcgacggccggcaacttcaac
aacgagatcggcgttccgctgaccttgctgcgcctgcgcgcgaagcaccagcatgcggtg
gtcgagctgggcatgaaccatccgggcgagatcgcgcggctcgcggccatcgcgcgtccg
accgtcgcgctggtcaacaacgcgcagcgcgagcacctggagttcatggccaccgtggaa
gcggtggcgctcgagaacggcgcggtgttttccttcgtgccggaggacggcaccgcggtg
ttcccgcacggcgacgaattcgctcctctgtggaacgacatggcgcacgacggcgccacg
cgccgctgcatgaccttcggcgagcatgaagacgccgacatctcgctggtggcggccgaa
tggcagcagggcgcatggcaggtccgcatccgcacgccgctgggcgacttcgatgcgcag
ttgcacatcgcgggccggcacaacgtcgtcaatgcgctggcggccaccgcgtgcgcgctc
gctaccggcattccgcccgagaccattgcgcgcggcctctcggccttcgaaccggtgaag
ggccgctccaaggcgagcgcggtgctgctgcccggcggccattcgctcacgctggtggac
gacagctacaacgccaatcccgattccgtgcgcgcggccatcgacgtgctcgcggccttg
cccggcccgcgcctcctggtgctcggcgacatgggcgaggtcggcaaccgcgcgcccgag
ttccatgccgaggtcggcgactgggcgcgccagcgcggcatcgaggccgtgtatgcgctc
ggcgccgaaaccgcgcacagcatcgcggccttcgacggcggcgacaacggccgccatttc
gcggacatcgaggcgctcggcgccgcggtgctggcgcggctgccccaggtggggagcgtg
ctcgtcaagggctcgcgcttcatgaagatggagcgcgtggtgcaggcgatcgagcaatca
cgacaacaacaaaaggaggccggtcatgacgcatga
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