Variovorax paradoxus S110: Vapar_0929
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Entry
Vapar_0929 CDS
T00916
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00260
Glycine, serine and threonine metabolism
vap00460
Cyanoamino acid metabolism
vap00630
Glyoxylate and dicarboxylate metabolism
vap00670
One carbon pool by folate
vap00680
Methane metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap01230
Biosynthesis of amino acids
vap01240
Biosynthesis of cofactors
vap04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Vapar_0929
09102 Energy metabolism
00680 Methane metabolism
Vapar_0929
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Vapar_0929
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Vapar_0929
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Vapar_0929
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Vapar_0929
Enzymes [BR:
vap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Vapar_0929
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ACS17580
UniProt:
C5CNG4
LinkDB
All DBs
Position
1:1022484..1023806
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AA seq
440 aa
AA seq
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MPAALQRRSWVPAASEDHVLAIAADAAARDALGIAAEIERLADDNHRIHDREGLNLNPAT
NVMNPAAEALLSRGLGSRASLGYPGDKYEVGLEAIERIEVIAAELAAEVFGSKFAEVRVS
SGALSNLYVFMATCRPGDTIIAPPPAIGGHVTHHAAGAAGLYGLKTVPAPVDADGYTVDA
AALARLAREVKPKLITIGGSLNLFPHPVPAIREVADSVGAKLLFDAAHLSGMVAGKAWPQ
PLEEGAHAITMSTYKSLGGPAGGLIVSNDAALMERIDAIAYPGLTANSDAGRTAALARGL
LDWKVHGRAYAAAMRETAQALAHALDAEGLPVFAKARGFTQSHQFALEAAHWGGGQRAAK
KLAEGGLLACGIGLPIAPVEGDINGLRLGVPEIVRLGFTPDDMPQLASWIARALEGGGAS
VAAEVRERRTRLGGLRYIVR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgccctccaacgccgctcctgggttcccgccgccagcgaagaccatgtgctc
gcgatcgccgccgatgccgctgcgcgcgatgcgctgggcatcgccgccgagatcgaaagg
ctcgccgacgacaaccaccgcatccacgaccgcgagggcctgaacctcaaccccgccacc
aacgtgatgaacccggccgccgaggcgctgctgtcgcgcggcctgggctcgcgggcatcg
ctgggctacccaggggacaagtacgaagtggggctggaggccatcgagcgcatcgaggtc
atcgcggccgaactggccgccgaggtgttcggctcgaagttcgccgaagtgcgcgtgagc
tccggcgcgctgtcgaatctctatgtgttcatggcaacctgccggcccggcgacacgatc
attgcgccgccgccggccatcggcggccacgtcacgcaccatgcggccggcgcggccggg
ctctatggattgaagacggtgcccgcgccggtcgatgccgacggctacacggtcgacgcg
gccgcgctcgccaggctcgcacgcgaggtgaagccgaagctcatcaccatcggcggcagc
ctgaatctttttccgcacccggtgcctgcgatccgcgaggtcgcggacagcgtgggcgcc
aaactgctgttcgacgctgcgcacctctcgggcatggtggccggcaaggcctggccgcag
ccgctcgaggagggcgcgcacgcgatcaccatgagcacctacaagagcctcggcggaccg
gccggcgggctgatcgtgtcgaacgatgcggcgctgatggagcgcatcgacgccatcgcc
taccccggcctcacggccaactccgatgcgggccgcaccgcggcgctggcgcgcggactg
ctcgactggaaggtgcacggcagggcctacgccgcggcaatgcgcgagaccgcgcaggcg
ctggcgcacgcgctcgacgccgagggcttgccggtgttcgcgaaggcgcgcggcttcacg
cagtcgcaccagttcgcgctcgaggccgcgcactggggcggtgggcagcgcgccgcgaag
aaactggccgagggcggcttgctggcctgcggcatcggcctgccgatcgcgccggtcgaa
ggagacatcaacggcctgcgcctgggcgtgccggagatcgtgcggctgggcttcacgccc
gacgacatgccgcagcttgcctcgtggatcgcgcgtgcgctggagggcggcggcgcatcg
gtggcggccgaggtgcgcgagcgccgcacgcggctcggcggcctgcgctacatcgtgcgc
tga
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