KEGG   Variovorax paradoxus S110: Vapar_0956
Entry
Vapar_0956        CDS       T00916                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
vap  Variovorax paradoxus S110
Pathway
vap00230  Purine metabolism
vap00240  Pyrimidine metabolism
vap01100  Metabolic pathways
vap01232  Nucleotide metabolism
Module
vap_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
vap_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:vap00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Vapar_0956
   00240 Pyrimidine metabolism
    Vapar_0956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vap03400]
    Vapar_0956
Enzymes [BR:vap01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Vapar_0956
DNA repair and recombination proteins [BR:vap03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Vapar_0956
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone
Other DBs
NCBI-ProteinID: ACS17607
UniProt: C5CNJ1
LinkDB
Position
1:complement(1050164..1053079)
AA seq 971 aa
MQTALNTPSTSRAVPSTPTQQQRDTAGSPAGQNLAHYQIIRRNGAVVPFEPNKIAIAMMK
AFLAVHGTQGAASASVRETVDALTQGVIRAMVRSRPGGGTFHIEDVQDQVELGLMRGGHH
EIARAYVLYRERRTQERSKQVEQEAPATPTLHVLDNGERVALDLNQLKGLIESACENLGD
SITAAPIVAETMRNLYDGVPLDEVYKASILAARTLIEKDPDYTFATARLLLHTIFKEIIG
REVMPAERATAYADYFPQFIKKGVENDLLDEKLLQYDLPRLGAALKAERDNQFDYLGLQT
LYDRYFLHVRKSRIELPQAFFMRVAMGLSLGEIDREARAIEFYEVLSSFDFMSSTPTLFN
AGTLRSQLSSCYLTTVPDDLDGIYESIKENALLSKFAGGLGNDWTRVRALGSHIKGTNGE
SQGVVPFLKVVNDTAVAVNQGGKRKGAVCTYLETWHLDIEEFLELRKNTGDDRRRTHDMN
TANWIPDLFMRRVMEKGTWTLFSPSNVPDLHDLFGADFEKAYVAYEEKAARGEIKPARTI
QASDLWRKMLTMLFETGHPWITFKDACNVRSPQQHAGVVHSSNLCTEITLNTSDTETAVC
NLGSVNLLQHLKDGKVDQEKLKRTISTAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGL
MGFQDALYELRIPYASQEAVQFADESMEAICYHAYWASTELARERGKYSSYKGSLWDKGI
LPIDTLDLLEKARGGYVEVDRSATLDWEALRQKIKADGMRNSNCVAIAPTATISNIIGVD
ASIEPCFGNLSVKSNLSGEFTVINHYLVRDLKRLGLWDDVMVMDLKHFDGSLRPIDRVPQ
DVKALYATAFEVETTWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWLRGLKT
TYYLRTQSATHAEKSTVQSGRLNAVSSGSDASSGMSALEAAAAAAKAQMSAMPATDIAFC
GVDDPTCEACQ
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgcaaacagccctgaacaccccatcgacctcgcgtgccgttccctccacgcccacgcag
cagcagcgcgacaccgccggctcgcccgccggacagaacctcgcgcactaccagatcatc
cgccgcaacggcgccgtggttcccttcgaacccaacaagatcgctatcgcgatgatgaaa
gccttcctggccgtgcacggcacccagggcgcggcttcggccagcgtgcgcgaaaccgtc
gacgcgctcacgcaaggcgtgatccgcgccatggtgcgttcgcgtccgggcggcggcacc
ttccacatcgaagacgtgcaggaccaggtcgaactcggcctgatgcgcggcggccatcac
gagatcgcgcgcgcctacgtgctctaccgcgagcgccgcacgcaggagcgttccaagcag
gtcgagcaggaagcgcccgccacccccacgctgcacgtgctggacaacggcgaacgcgtc
gcgctcgacctgaaccagctcaagggcctgatcgaatcggcctgcgaaaacctgggcgac
agcatcaccgctgcgccgatcgtcgctgaaacgatgcgcaacctgtacgacggcgtgccg
ctcgacgaggtctacaaggcctcgatcctggcggcccgcacgctgatcgaaaaagacccc
gactacacctttgccaccgcccgcctgctgctgcacacgatcttcaaggagatcatcggc
cgcgaagtgatgcccgccgagcgcgccaccgcctacgccgactacttcccgcagttcatc
aagaagggcgtcgagaacgacctgctcgacgagaagctgctgcagtacgacctgccgcgc
ctgggcgccgcgctcaaggccgaacgcgacaaccagttcgactacctcggcctgcaaacg
ctgtacgaccgctacttcctgcacgtgcgcaagtcgcgcatcgaactgccacaggccttc
ttcatgcgcgtggccatgggcctgtcgctcggcgaaatcgaccgcgaggcccgcgccatc
gagttctacgaggtgctgtcgtccttcgacttcatgtcgagcacgcccaccctgttcaac
gccggcacgctgcgctcgcagctgtccagctgctacctgaccaccgtgcccgacgacctg
gacggcatctacgaatcgatcaaggaaaacgcgctgctctccaagttcgcgggcggcctg
ggcaacgactggacccgcgtgcgcgcgctcggcagccacatcaagggcaccaacggcgaa
tcgcagggcgtggtgcccttcctcaaggtggtcaacgacacggccgtggccgtgaaccag
ggcggcaagcgcaagggcgccgtctgcacgtacctggaaacctggcacctcgacatcgag
gagttcctggaactgcgcaagaacaccggcgacgaccgccgccgcacgcacgacatgaac
accgccaactggatccccgacctcttcatgcgccgcgtgatggaaaagggcacctggacg
ctgttctcgccctccaacgtgcccgacctgcacgacctgttcggcgccgacttcgagaag
gcgtatgtcgcctacgaagaaaaggccgcgcgcggcgagatcaagcctgcccgcaccatc
caggcctcggacctgtggcgcaagatgctcacgatgctgttcgagaccggccatccctgg
atcacgttcaaggacgcctgcaacgtgcgctcgccgcagcagcacgccggcgtggtgcac
tcgtcgaacctgtgcaccgagatcacgctgaacaccagcgacaccgaaaccgccgtctgc
aacctgggttcggtgaacctgctgcagcacctgaaggacggcaaggtcgaccaggaaaag
ctcaagcgcaccatctcgaccgcgatgcgcatgctcgacaacgtgatcgacatcaactac
tacgccgtgaagaaggcgcgcgactcgaacctgcgccaccgcccggtcggcctgggcctg
atgggcttccaggacgcgctgtacgaactgcgcattccctacgcttcgcaggaagccgtg
cagtttgccgacgagtcgatggaagccatctgctaccacgcctactgggcctcgaccgag
ctggcccgcgaacgcggcaagtactcgagctacaagggctcgctgtgggacaaggggatc
cttccgatcgacacgctcgacctgctcgaaaaagcccgcggcggctacgtcgaagtggac
cgctcggccacgctcgactgggaggccctgcgccagaagatcaaggccgacggcatgcgc
aattccaactgcgtggccatcgccccgaccgcgaccatctcgaacatcatcggcgtcgac
gcttccatcgagccctgcttcggcaacctctcggtcaagtcgaacctgtcgggcgaattc
accgtcatcaaccactacctggtgcgcgacctgaagcgcctgggcctgtgggacgacgtg
atggtgatggacctgaagcacttcgacggttcgctgcgtccgatcgaccgcgtgccgcag
gacgtgaaggcgctctacgccaccgcgttcgaagtcgagaccacctggctggtcgaagcc
gcagcgcgccgccagaagtggatcgaccaggcgcagtcgctcaacatctacatggccggc
gcatcgggcaagaagctcgacgacacctacaagctcgcatggctgcgcggcctgaagacc
acctactacctgcgcacgcagagcgcgacgcacgccgagaaatccaccgtgcagtcgggc
cgcctcaacgcggtgtcgtcgggcagcgatgcctcttcgggcatgagcgcactcgaagcc
gcagctgccgcagcgaaggcgcagatgagtgcaatgcctgccaccgacatcgcgttctgc
ggcgtcgacgatccgacttgcgaagcatgccaatga

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