Variovorax paradoxus S110: Vapar_1044
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Entry
Vapar_1044 CDS
T00916
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K23508
galactofuranose transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_1044
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_1044
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Galactofuranose transporter
Vapar_1044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Peripla_BP_6
ABC_sub_bind
Bmp
B12-binding
Aminotran_5
Glyco_trans_1_4
DUF4382
DUF2325
Motif
Other DBs
NCBI-ProteinID:
ACS17695
UniProt:
C5CPH4
LinkDB
All DBs
Position
1:1142286..1143251
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AA seq
321 aa
AA seq
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MKLNRRTLNIALAAASLGGLLPATALAQKKIVLGFSQVGAESEWRTANTESIKASAKEAG
IELKFSDAQQKQENQIKAIRSFIAQKVDVIAFSPVVESGWETVLREAKAAKIPVVLTDRS
VNTKDDSLYVTFMGSDFVEEGRKAGRWLVEKMKDQKGEVNIVELQGTVGSAPAIDRKKGF
EEIIKADPKFKILRSQTGDFTRAKGKEVMEAFLKAEGKKINVLYAHNDDMAIGAIQAIEE
AGLKPAKDITIISIDAVKGAFEAMIAGKLNVSVECSPLLGPQLMSAVKDIKAGKQLPKRI
VTEETIFPMEVAAKEFPNRKY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaatcgccgcaccctcaatatcgcactcgccgccgcctcgctcggcgggctc
ctgcccgccaccgcgctggcgcagaagaagatcgtgctcggcttcagccaggtgggcgcc
gagagcgaatggcgcaccgccaacaccgagtcgatcaaggcctcggccaaggaagccggc
atcgagctcaagttctccgacgcgcagcagaagcaggaaaaccagatcaaggcgatccgc
tcgttcatcgcgcagaaggtggacgtgatcgccttctcgccggtggtcgaatcgggctgg
gagaccgtgctgcgcgaagccaaggccgccaagatcccggtggtgctgaccgaccgctcg
gtgaacaccaaggacgactcgctctacgtgaccttcatgggctccgacttcgtcgaggaa
ggccgcaaggcgggccgctggctggtcgagaagatgaaggaccagaagggcgaggtgaac
atcgtcgagctgcagggcaccgtgggctcggctccggctatcgaccgcaagaagggcttc
gaggaaatcatcaaggccgaccccaagttcaagatcctgcgctcgcagaccggcgacttc
acgcgcgccaagggcaaggaagtgatggaagccttcctgaaggccgagggcaagaagatc
aacgtgctctacgcgcacaacgacgacatggccatcggcgccatccaggccatcgaggaa
gcgggcctgaagccggccaaggacatcacgatcatctcgatcgatgccgtcaagggcgcc
ttcgaagccatgatcgccggcaagctcaacgtgtcggtcgaatgcagcccgctgctcggc
ccccagctgatgagcgccgtgaaggacatcaaggccggcaagcagctgcccaagcgcatc
gtgaccgaagagacgatcttcccgatggaagtcgccgccaaggaattccccaatcgaaaa
tattga
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