Variovorax paradoxus S110: Vapar_1060
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Entry
Vapar_1060 CDS
T00916
Name
(GenBank) ABC transporter related
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_1060
Transporters [BR:
vap02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Vapar_1060
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA
AAA_29
SbcC_Walker_B
AAA_22
AAA_16
ABC_ATPase
NB-ARC
MMR_HSR1
PufQ
Zeta_toxin
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ACS17711
UniProt:
C5CPJ0
LinkDB
All DBs
Position
1:1162123..1164405
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AA seq
760 aa
AA seq
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MQHHDPVGTREGEIEAASDALKSRLAAAENVLVTLPVDLDDELLFTFGLVALTDRRLLAL
QPDGQWCEWTLSDSALRLHLSDHSGVGTLDLVGAEGRLARWRYTLASQPAALRLLKLFGQ
RENGTVAEATAEPDGDELALPDAELQAPPSTWVLLRLGRFAKPYRKQLIAGFLLTLVSTA
ATLVPPYLTIPLMDDILIPFQNGQKIDPARVGLYLSGLLGAALVGWGLGWARTYLLALVS
ERIGADLRTTTYEHLLTLPLDYFGGKRTGDLMARIGSETDRINVFLSLHALDFANDVLMI
VMTAVILVSINPLLAVVTLVPLPFIAWMIHVVRDRLRTGFEKIDRVWSEVTNVLADTIPG
IRVVKAFAQERREAERFRVANAYNLQVNDKLNRTWSLFTPTVSLLTEIGLLVVWGFGIWQ
VARGSITVGVLTAFIAYIGRFYTRLDSMSRIVSVTQKAAAGAKRIFDILDHVSNVPEPAN
PVKIERVQGRIEMSGLGFRYGSRAVIHDLDLTIEPGEMIGLVGHSGSGKSTLVNLICRFY
DVTDGAIKVDGTDIRRFAVADYRRHVGLVLQEPFLFFGTIAQNIAYGKPDATRAEVVAAA
RAAHAHDFILRLPHGYDSLVGERGQGLSGGERQRISIARALLIDPRILILDEATSAVDTE
TEKEIQKALDNLVQGRTTIAIAHRLSTLRKADRLVVMDRGEVVEVGPHDALMEKQGAYWR
LYQAQLRQADEEASEGAVDERAGAQLPLVMSHAAHPAGDA
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcacgatccagtcggcacccgggagggcgaaatcgaggcggcctcagacgcg
ctgaaaagccggctcgcagccgcggaaaacgttctggtcacactgccggttgaccttgac
gatgaacttctgtttacctttgggctcgtggccctcaccgaccggcggctgctggcgctg
caaccggatggccagtggtgtgagtggacactatcagattcagccctccgtttgcatttg
agcgaccattccggcgttggaacgctcgatctggtgggcgccgagggccgccttgcgcgc
tggcgctacacgctggcgagccagccggccgcgctgcggctgctcaagctcttcggccag
cgcgagaacggcactgtcgccgaggcgacagccgaacccgatggcgacgagctggccctg
cccgacgccgagctccaggcgccgccctccacctgggtgctgctgcggctcggccgcttc
gccaagccctaccgcaagcagctgatcgcgggcttcctgctgacgctggtctccacggcc
gcgacgctggtgccgccctacctgaccatcccgctgatggacgacatcctgattccgttc
cagaacgggcagaagatcgacccggcgcgcgtcgggctctacctgagcgggctgctgggc
gcggcgctggtcggctggggcctgggctgggcgcgcacctacctgctggcgctggtgtcc
gaacgcatcggcgccgacctgcgcaccaccacctacgagcacctgctcacgctgccgctc
gactatttcggcggcaagcgcaccggcgacctcatggcgcgcatcggctcggaaaccgac
cgcatcaacgtgttcctctcgctgcacgcgctcgactttgcgaacgacgtgctgatgatc
gtgatgaccgcggtcatcctggtttccatcaacccgctgctggccgtggtcacgctggtg
ccgctgcccttcatcgcctggatgatccacgtggtgcgcgaccggctgcgcaccggcttc
gagaagatcgaccgcgtgtggtccgaggtcaccaacgtgctggccgacaccatcccgggc
atccgcgtggtcaaggcctttgcgcaggagcgccgcgaagccgagcgcttccgcgtggcc
aacgcctacaacctgcaggtcaacgacaagctcaaccgcacctggtcgctgttcacgccc
accgtctcgctcttgaccgagatcggcctgctcgtggtctggggcttcggcatctggcag
gtggcgcgcggcagcatcacggtgggcgtgctcacggccttcattgcctacatcggccgc
ttctacacgcggctcgactcgatgagccgcatcgtctcggtcacgcagaaggcggcggcc
ggcgccaagcgcatcttcgacatcctggaccacgtgagcaacgtgcccgagcccgccaac
ccggtgaagatcgagcgcgtgcagggccgcatcgagatgagcgggctgggctttcgctac
ggctcgcgcgccgtgatccacgacctcgacctgaccatcgagcccggcgagatgatcggc
ctggtgggccacagcggctcgggcaagagcacgctggtcaacctgatctgccgcttctac
gacgtgaccgacggcgccatcaaggtcgacggcaccgacatccgccgctttgccgtggcc
gactaccggcgccacgtggggctggtgctgcaggagccgttcctgttcttcggcaccatc
gcgcagaacatcgcctacggcaagcccgacgccacacgcgccgaagtggtggccgccgcg
cgcgccgcgcatgcgcacgacttcatcctgcgcctgccgcacggctacgactcgctggtg
ggcgagcgcggccagggcctgtcgggcggcgagcggcagcgcatcagcattgcgcgcgcg
ctgctgatcgacccgcgcatcctgatcctcgacgaggccacctcggcggtggacaccgag
accgagaaggaaatccagaaggcactcgacaacctcgtgcagggccgcaccaccatcgcc
attgcgcaccggctgtcgacgctgcgcaaggccgaccggctggtggtcatggaccgcggc
gaggtggtcgaggtcggtccgcacgacgctttgatggagaagcagggcgcctactggcgg
ctctaccaggcgcagctgcgccaggccgacgaggaggcgagcgaaggcgccgtcgacgaa
cgcgccggcgcgcagctgcccttggtcatgagccatgcggcccatcccgccggagacgca
tga
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