Variovorax paradoxus S110: Vapar_1125
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Entry
Vapar_1125 CDS
T00916
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_1125
Transporters [BR:
vap02000
]
Other transporters
Pores ion channels [TC:
1
]
Vapar_1125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ACS17776
UniProt:
C5CPQ5
LinkDB
All DBs
Position
1:1235476..1237605
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AA seq
709 aa
AA seq
DB search
MKPALSAAATAAVRLLLLGAPLAAAAQQADRGSLPEVTVSTPRGEVAPFNVPGSVDRVDG
AEMRDSRLQVNLSESLGSVPGLQVQNRLNYAQDLQLSIRGFGARSTFGVRGVRLYVDGIP
ATLPDGQGQTSNIDIGSLDRIEILRGPFSALYGNSSGGVLQAFTASGEGAPRLSYSAAGG
SFGTWRQSLQASGSQGAVDYLLNASRFRTDGWREHSAARRDIANGKLGIALDNGDKLTLV
LNSVRISAQDPLGLTADQYALAPRSAPLATQYDTRKTVEQTQAGLLYERRIDAAQSLRLM
VYGGERKTVQYQSIPPSAQQNPLHAGGVIDLKRQYGGADLRWTAALQLADRPLELVAGLG
YDSLREQRRGYENYLGRVAAPVLGVQGRLRRSERNEVWNLDPYAQATWRLAEQWTLEAGM
RRSSVHFDSQDRYIVGANRDDSGSARYSKTLPVASLRYQATPDLALYGSIGRGFETPTLN
ELSYRAGGASGLNFALRPSVNDSVELGAKARLGGGLLTAALFQTRTRDEIVTDTNTGGRA
TFQNAGRTRRNGFELAWQHETASHWRTQLAYTWLDARYRDAFCSPSPCAASNTVAAGNRI
PGIARQSLFASLGWVPPEGWRAGVEMRALGRMQANDANTASAPGYAVAALYAGYLKKWER
WEFNAFARVDNLFDRRYVGSLIVNEGNARYYEPAPGRNWTVGLSGAYRF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgcactttccgctgccgccactgccgccgtccgcctgctcctgctgggagct
ccgctcgccgcagcggcgcagcaggccgaccgcggcagcctgcccgaagtcaccgtctcc
acgccgcgcggcgaggtcgctccgttcaacgtgccgggctcggtggaccgggtcgacggc
gccgagatgcgcgacagccggctgcaggtcaatctttccgaaagcctgggcagcgttccg
ggcctgcaggtgcagaaccgtctgaactacgcgcaggacctgcagctgtcgatccgtggc
ttcggcgcgcgttccaccttcggcgtgcgcggcgtgcggctgtatgtcgacggcattccc
gcgacgctgcccgatggccagggccagacttccaacatcgacatcggctcgctcgaccgc
atcgagatattgcgcgggccgttctcggcgctctacggcaattcgtcgggcggcgtgctg
caggccttcaccgcgtcgggcgagggcgcgccgcggctttcgtactcggcggccggaggc
agcttcggcacctggcgccagtcgctccaggccagcggatcgcagggcgcggtcgactac
ctgctgaacgccagccgcttccggaccgacggctggcgcgaacacagcgcggcacggcgc
gacattgcgaacggcaagctcggcatcgcgctggacaacggcgacaagctcacgctggtg
ctcaacagcgtgcgcatcagcgcgcaggatccgctgggcctcacggccgaccagtacgcg
ctcgcgccgcgcagcgcaccgctcgccacgcagtacgacacccgcaagacggtggagcag
acgcaggccggcctgctctatgagcggcgcatcgatgccgcgcagtcgctgcggctcatg
gtctacggcggcgagcgcaagaccgtgcagtaccagtcgattccgccgtcggcgcagcag
aacccgctgcatgcgggcggcgtgatcgacctcaagcgccagtacggcggagccgacctg
cgctggaccgccgcgctgcaactggccgaccggccgctcgaactggtggcggggctgggc
tacgacagcctgcgcgaacagcgccgcggctacgagaactacctcggccgcgtggccgca
cccgtgctgggcgtgcaggggcgcctgcggcgcagcgagcgcaacgaggtctggaacctc
gacccctacgcgcaggccacctggcgccttgcggagcaatggacgctcgaggccggcatg
cgccgcagcagcgtgcacttcgattcgcaggaccgctacatcgtgggcgccaaccgcgac
gacagcggcagcgcgcgctacagcaagacgctgcccgtggcttcgctgcgctaccaggcc
acgcccgatcttgcgctgtacggctcgatcggccggggcttcgagacgccgacgctcaac
gagctgtcgtaccgcgcaggcggtgccagcgggctcaacttcgcgctgcggccctcagtc
aacgacagcgtcgaactgggtgcgaaggcgcggctgggcggagggctgctgacggcggcg
ctgttccagacccgcacccgcgacgagatcgtgaccgacaccaacaccggcggccgcgcc
acgttccagaatgcgggccgcacgcggcgcaacggcttcgagctggcctggcagcacgag
acggccagccactggcgcacccagctggcctacacctggctcgacgcgcgctaccgcgat
gccttctgctcgccgtcgccctgcgcggcatccaacacggtggcggcgggcaaccgcatt
ccgggcattgcgcggcagtcgctcttcgcatcgctgggctgggtgccgcccgaaggctgg
cgcgccggcgtcgagatgcgcgcgctcgggcgcatgcaggccaacgacgccaacaccgcc
agcgcgccgggttatgccgtcgcggcgctgtacgccggctacctgaagaaatgggagcgc
tgggagttcaacgcctttgcgcgcgtcgacaacctgttcgaccgccgctacgtgggctcg
ctgatcgtcaacgagggcaatgcgcgctactacgagcccgcgccgggccgcaactggacg
gtgggcctgagcggcgcctaccgcttctga
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