Variovorax paradoxus S110: Vapar_1139
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Entry
Vapar_1139 CDS
T00916
Name
(GenBank) penicillin-binding protein, 1A family
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00550
Peptidoglycan biosynthesis
vap01100
Metabolic pathways
vap01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Vapar_1139
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Vapar_1139
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vap01003
]
Vapar_1139
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vap01011
]
Vapar_1139
Enzymes [BR:
vap01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Vapar_1139
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Vapar_1139
Glycosyltransferases [BR:
vap01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Vapar_1139
Peptidoglycan biosynthesis and degradation proteins [BR:
vap01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Vapar_1139
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ACS17790
LinkDB
All DBs
Position
1:complement(1250662..1252986)
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AA seq
774 aa
AA seq
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MVWGFGIAAAGVLALLCVIAVALAVAYPNLPDISELSDYRPKLPLRVFSAEGILIGEFGE
ERRNLTPIAAIPKLVKEAVLAAEDTRFYDHGGVDYKGMVRAGLANMNRVKSQGASTITMQ
VARNVYLSSEKTLTRKIYEVLLTFKLEHLLTKDQIFEIYLNQIYLGNRAYGFAAASEAYF
GKPLQELSIAQAAMLAGLPKAPGANNPVNNPQRARGRQFYVIDRMQDAGFITAEQAAEAK
KEELHLRDAADPNRLHAEYVAETVRQLMYAQYGDSTYTRGLKVYTSLVAADQAAAYKALR
KGIMDYERRQIYRGPEKFVELPNDPKELDDAVDDALTDHPDNGDVMAAVVLKANAKEISA
VRGNGDPVQITGEGLKPAQSGLADKAPPNIKIRRGAVIRVVKTPKNTWEITQLPEVEGAF
VAMDPRDGAIKALVGGFDFGKNKFNHVTQAWRQPGSSFKPFIYSAALEKGFTPATVINDG
PLFFDAGTTGGQPWEPKNYGGGYDGPMSMRTALMKSKNLVSIRILQSIGTRYAQEWITNF
GFDKDKHPAYLPMALGAGAVTPMQMATAYSVFANGGYRVNPYLVTRITDHKDKVLVDKQP
PLLNETIRAIPQRNAFIMDTLLQSVARAGTAAKAQAMLKRPDLYGKTGTTNDSLDAWFAG
FQPTMTAISWIGYDTPRNLGDRETGGGLSLPIWINYMETAIKGVPVTDLSATPPSGVVSV
GGEWYYDDYAPGRGVPSLGVDTASSPPAESLSGVPVSPPPPPEERNRILDLFRN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggtctgggggttcggcatcgccgcggccggtgttctggcgctgctgtgcgtgatcgcc
gtcgccctggctgtggcctaccccaaccttcccgacatctccgagctgtcggactaccgg
ccgaaactgccgctgcgggtcttttccgcggagggcatcctgattggcgaattcggcgag
gagcggcgcaatctaaccccgatcgcggcaatccccaagctcgtgaaggaggcggtgttg
gctgccgaagacacccgcttctacgaccacggcggcgtcgactacaagggcatggtgcgc
gccggcctggccaacatgaaccgcgtgaagagccagggcgcctcgaccatcaccatgcag
gtggcgcgcaacgtctacctgagctccgagaaaacgctgacccgcaagatctacgaggtg
ctgctcaccttcaagctggagcacctgctcaccaaggaccagatcttcgagatctacctg
aaccagatctacctgggcaaccgcgcctacggcttcgcggccgcgtcggaagcgtatttc
ggcaagccgctgcaggagctctccattgcgcaggcggccatgctggcgggcctgcccaag
gcgccgggcgcgaacaaccctgtcaacaatccgcagcgcgcgcgcggccgccagttctat
gtgatcgaccgcatgcaggacgcgggcttcatcaccgccgagcaggccgccgaagccaag
aaagaggaactgcacctgcgcgatgcggccgacccgaaccgcctgcacgccgaatacgtg
gccgaaaccgtgcgccagctgatgtatgcgcagtacggcgacagcacctacacgcgcgga
ctcaaggtctacacctcgttggtcgccgccgaccaggctgcggcatacaaggccctgcgc
aagggcatcatggactacgagcggcgccagatctaccgcggccccgagaaattcgtcgag
ctgcccaacgacccgaaggagctcgacgatgcggtcgacgacgcgctgaccgaccatccc
gacaacggcgacgtgatggcggccgtggtgctcaaggccaacgccaaggaaatctcggcc
gtgcgcggcaacggcgacccggtgcagatcacgggcgagggcctcaagcccgcgcagtcc
ggccttgccgacaaggcgccgcccaacatcaagatccggcgcggcgcggtgatccgcgtg
gtgaagacgcccaagaacacctgggaaatcacccagctgcccgaagtggaaggcgccttc
gtcgccatggacccgcgcgacggcgccatcaaggcgctggtgggcggcttcgacttcggc
aagaacaagttcaaccacgtcacgcaggcctggcgccagccgggctcgagcttcaagccc
ttcatctactcggccgcgctcgagaagggcttcacgccggccacggtcatcaatgacgga
cccctgttcttcgatgccggcaccaccggcggccagccctgggagcccaagaactacggc
gggggctacgacggcccgatgtcgatgcgcaccgcgctcatgaagtcgaagaacctggtc
tcgatccgcatcctgcaatcgatcggcacgcgctacgcccaggaatggatcaccaatttc
ggcttcgacaaggacaagcacccggcctacctgccgatggcgctgggcgccggcgcggtc
acgccgatgcagatggccaccgcctactcggtgttcgccaatggcggctaccgcgtcaat
ccctacctggtgacccgcatcaccgaccacaaggacaaggtgctggtcgacaagcagccg
ccgctgctcaacgagacgatccgcgccattccccagcgcaacgcgttcatcatggacacg
ctgctgcaatcggtggcgcgcgccggcaccgcggccaaggcccaggccatgctcaagcgg
cccgacctctacggcaagaccggcaccaccaacgattcgctcgacgcctggttcgccggc
ttccagcccacgatgaccgccatctcctggatcggctacgacacgccgcgcaacctgggc
gaccgcgaaaccggcggcggcctgagcctgccgatctggatcaactacatggaaacggcg
atcaagggcgtgcccgtgaccgatctttccgccacgccgccgtccggcgtcgtgagcgtg
ggcggcgagtggtactacgacgactacgcgccgggccgcggcgtgcccagcctcggcgtg
gacaccgcttcatcgccgccggccgagtccctgagcggcgttccggtgagcccgcccccg
cctcccgaggagcgcaaccgcatcctcgaccttttcaggaactga
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