Variovorax paradoxus S110: Vapar_1144
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Entry
Vapar_1144 CDS
T00916
Name
(GenBank) type IV pilus secretin PilQ
KO
K02666
type IV pilus assembly protein PilQ
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vap02044
]
Vapar_1144
02035 Bacterial motility proteins [BR:
vap02035
]
Vapar_1144
Secretion system [BR:
vap02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Vapar_1144
Bacterial motility proteins [BR:
vap02035
]
Pilus system
Pilus assembly proteins
Vapar_1144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
AMIN
Secretin_N
STN
type_II_gspD_N0
Motif
Other DBs
NCBI-ProteinID:
ACS17795
UniProt:
C5CQG9
LinkDB
All DBs
Position
1:1256232..1258376
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AA seq
714 aa
AA seq
DB search
MNHKKSTMAQRLRAAGLGLLALGAFALAHAQNAIEAVTSSTQSGAEVIRIDLAQPLAALP
TGFVVQTPARIALDFPGVTNAIGRSAIEVNQGNLRSVNVVQAGERSRVVLNLKQATAYKT
EIQGKSLLVILEPAAGAALASSTPTVFAENRNRDTLPLRDVDFRLGADNTGRVIVDLPNN
QVGVDVKQQGKSLVVEFTKSTLPEGLRRRLDVADFNTPVQLITSQQSGDRVRMTIEAKGD
WEHSAYQSENQFVVEVRARKVDPAKLTQGVGYNGEKLSLNFQNIEIRSLLQVIADFTNFN
IVTSDSVTGALTLRLKDVPWDQALDIIMQAKNLGMRKNGSVLWIAPKDEINAKEKLEFEA
KAAIENLEPLRTQSFQLNYTKAIAIAQGLTGTGASAGGGGGSGTTTRILSPRGSVIAESR
TNQLFVSDIPSRLAQVADLIQKLDIPVRQVLIEARIVEASDTFGKSLGVRLGGGISRERV
ASANGNPAYGTFGVMPVTTAAGGVGGATATWTNSNFINLPAGDAGGTGNAPGTFAISLFN
SSLSRMLNLEISALEADGKGKLVSSPRVITADQTKALIEQGEEIPYQQATSSGATSISFR
KAVLKLEVTPQITPEGNIILTLDVSKDARGVNTSAGPAINTKHVQTEVLVENGGTVVIGG
IFELTETNDESRVPVLGEVPYLGALFRKRERVANKTEMLVFITPKMITDRNAAR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaatcataaaaaatcaacgatggcacagcggctgcgagctgcggggctgggtctgctg
gcacttggcgctttcgctttggcccatgcgcaaaacgccatcgaggcggtgaccagttcg
acgcagtccggcgcggaagtgatccgcatcgaccttgcccagccgctcgcggccttgccg
accggctttgtcgtgcagacgccggcgcgcatcgcgctcgattttccgggcgtcaccaac
gccatcggccgctctgccattgaggtgaaccagggcaacctgcgttccgtcaatgtggtc
caggccggcgagcgcagccgggtggtgctgaacctcaagcaggcaaccgcatacaagacc
gagatccagggcaagtcgctgctggtgattctcgaacccgcggccggcgccgcgctggcg
tcgtccacgcccaccgtctttgccgagaaccgcaaccgcgacacgctgccgctgcgcgac
gtcgacttccgcctgggtgcggacaacaccggccgcgtgatcgtcgacctgccgaacaac
caggtgggcgtcgatgtcaagcagcagggcaagagcctcgtggtggagttcaccaagtcg
acgctgcccgagggcttgcgccgccgcctcgacgtggccgacttcaacacgccggtccag
ctgatcacctcgcaacagtcgggcgaccgcgtgcgcatgacgatcgaggccaagggcgac
tgggagcacagcgcctaccagagcgagaaccagttcgtggtggaggtccgcgcccgcaag
gtggacccggccaagctgacgcagggcgtgggctacaacggcgagaagctgtcgctgaac
ttccagaacatcgagatccgctcgctgctgcaggtgattgccgacttcaccaacttcaac
atcgtgacctccgactcggtcaccggcgcgctgacgctgcggctgaaggacgtgccctgg
gaccaggccctggacatcatcatgcaggccaagaacctgggcatgcgcaagaacggcagc
gtgctgtggatcgcgcccaaggacgagatcaacgccaaggaaaagctcgaattcgaagcc
aaggccgcaatcgagaacctggagccgctgcgcacccagtcgttccagctcaactacacc
aaggccattgccattgcgcagggcctgaccggcaccggcgcctcggccggcggcggtggc
ggctccggcaccaccacgcgcatcctgagcccgcgcggcagcgtgatcgcggagtcgcgc
accaaccagctgttcgtgtcggacattccctcgcgcctggcgcaagtggccgacctgatc
cagaagctcgacatcccggttcggcaggtgctgatcgaagcgcgcatcgtggaagcctcc
gacaccttcggcaagtcgctgggcgtgcggctgggcggcggtatctcccgcgaacgcgtc
gcgtcggccaacggcaatccggcatacggcaccttcggcgtcatgcctgtcaccaccgcc
gccggcggcgtgggcggcgcaacagccacctggaccaactccaacttcatcaacctgccc
gcaggcgatgccggcggcaccggcaatgcgcccggcaccttcgcgatctcgctgttcaac
tcgagcttgtcgcgcatgctgaacctcgagatctcggcgctcgaggccgacggcaagggc
aagctggtgtccagcccgcgcgtcatcacggccgaccagaccaaggcgctgatcgagcag
ggcgaggaaattccctaccagcaggccacgtccagcggcgccacctccatctcgttccgc
aaggcggtgctgaagctcgaggtcacgccgcagatcacacccgaaggcaacatcatcctc
acgctcgacgtgagcaaggatgcccgcggcgtcaacacctcggccggcccggccatcaac
accaagcatgtgcagaccgaggtgctggtcgagaacggcggcacggtcgtcatcggtggt
atcttcgaactcaccgaaaccaatgacgaatcgcgcgtgccggtgctgggtgaagtgccc
tacctgggtgcactgttccgcaagcgcgaacgcgttgccaacaagaccgaaatgctcgtc
tttatcactccgaagatgattaccgaccgcaacgccgcgcgctga
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