Variovorax paradoxus S110: Vapar_1189
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Entry
Vapar_1189 CDS
T00916
Name
(GenBank) polysaccharide export protein
KO
K01991
polysaccharide biosynthesis/export protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Vapar_1189
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_1189
Transporters [BR:
vap02000
]
Other transporters
Pores ion channels [TC:
1
]
Vapar_1189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB_2
Poly_export
SLBB
Wza_C
DUF6801
Motif
Other DBs
NCBI-ProteinID:
ACS17840
UniProt:
C5CQL4
LinkDB
All DBs
Position
1:1299380..1300543
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AA seq
387 aa
AA seq
DB search
MGINLTRFVNPKGWGFALMGALLLQGCAPGFNSMGAYEADQSLPPEFQYLPADGAPDGVI
TSISPALIRTMAESQPAAVPAEVKALFGESPVYTIGPGDVVGVIVYDHPELLPNAGAVIT
QQADPTGISVAPGFIVGADGQITFPYIGRVKLQGLTEIEASDLIADRIATYIKAPQVTVR
IQSFRSRRAFVEGEVRNPGLQIFTDVPMTLAEALSRAGGITANGDRSFVTLTRGDKTTLI
NLPNLQDLGADASRIPLRNGDVVQVRHRDESKVFVMGEIARPSALLMHNGRLSLNEALGE
AGGPNLTSANTGQIYVIRNNARGLPAIFHLNARNPAALGLAERFPLQPRDVVYIDSVPLV
TWNRLASLILPAAQVINSGDEVWSRHR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggggatcaatttgacacgcttcgtgaacccgaaggggtggggttttgccctaatgggc
gcgttattgctgcagggctgcgcaccgggcttcaattccatgggcgcctacgaggcggac
cagagcctgccgccggagttccagtacctgccggccgacggtgcgccggatggcgtcatc
acgtccatctcgccggccttgatccgcacgatggccgagtcccagccggccgcggttcct
gcagaggtgaaagcgctcttcggcgaatcgccggtctacaccatcggcccgggcgacgtc
gtgggcgtgatcgtctatgaccacccggaactgctgccgaatgccggtgcggtgatcacg
cagcaggccgacccgacgggcatcagcgtggcgcccggcttcatcgtcggcgcggacggg
cagatcaccttcccctacatcggccgcgtcaagctccaggggctgaccgagatcgaggcc
tccgacctcattgcggaccgcatcgccacctacatcaaggctccgcaggtcacggtgcgc
atccagtccttccgaagccggcgcgccttcgtcgagggcgaagtgcgcaacccggggctg
cagatcttcaccgacgtgccgatgacgctggccgaagccctgagccgggccggcggcatc
accgccaatggcgaccgctcgttcgtgacgctcacgcgcggcgacaagaccacgctcatc
aacctgcccaacctgcaggacctgggcgccgacgccagcaggattccgctgcgcaacggc
gacgtggtccaggtgcggcaccgcgacgagagcaaggtgttcgtgatgggcgaaattgcc
cgtccgtcggcgctgctcatgcacaacgggcggctcagcctcaacgaggcgctgggcgag
gccggcggccccaacctgacttcggccaacacgggccagatctacgtcatccgcaacaac
gcgcggggcttgccggccatcttccacctgaacgccaggaacccggcggcgctgggcctg
gccgagcgcttcccgctgcagccgcgcgatgtcgtctacatcgattccgtgccgctggtc
acctggaaccgcctggccagcctgatcctgccggctgcgcaagtgatcaattccggcgac
gaggtctggagccgccacagatga
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