Variovorax paradoxus S110: Vapar_1228
Help
Entry
Vapar_1228 CDS
T00916
Name
(GenBank) ABC transporter related
KO
K01995
branched-chain amino acid transport system ATP-binding protein
K01998
branched-chain amino acid transport system permease protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_1228
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_1228
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_1228
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Vapar_1228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_29
RsgA_GTPase
SMC_N
AAA_27
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ACS17879
UniProt:
C5CQQ3
LinkDB
All DBs
Position
1:complement(1341870..1343765)
Genome browser
AA seq
631 aa
AA seq
DB search
MNNTPSSTTATAAAPAGRALVTPRQLTLACVAALALAWGFLPEFTVSVLSNIGLYALVAA
GLVMLTGVGGMTSFGQAAFVGMGAYATAWICTSPMAAAWLGGAVGPALLPWAGLMLGLAF
TFALAWALGAVTLKLQGHYLPLCTIAWGLSLYYLLGNMDFLGGQTGITGVPPLVIAGYSL
ATPRALGVVIWAVLLLALWAMHNLLDSREGRAIRALKGGRLMAESMGVDTARHRVKLFVL
AALLAAVSGWLYAHLQRFVNPTPFNLNIGIELLFMAVVGGAGHLWGAVLGAALITLLKEK
LQDVLPSLLGSSGNFEVIVFGLLMLFVLQRFADGLWPTLARIASRWVRPHAPAASPTAPA
VQLAHRNLPARGEVLLQATKVSKRFGGLVANNDISMTLKAGEIHALIGPNGAGKSTFFNM
VSGVDDPSAGEVRLAGQAMTARPSRVFAALGLGRTFQHVRLLGARSVAENVALGAHLRAR
RGWLAAMLRLDRAEEAALMAEARRQIERCGLGAHADTPAASLSLGQQRVVEIARALAGQP
SVLLLDEPAAGLRHLEKRALSVLLDQLRAEGLGILVVEHDMEFVMNLADRITVLEFGTVI
ATGTPAEVQANPRVLEAYLGGADDELLEDAR
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaccccgtccagcaccactgcaaccgccgccgcaccggccggccgcgcgctg
gtcacgccccggcagctgacgctcgcctgcgtggcggcgctggccctcgcctggggcttc
ctgccggagttcacggtctcggtcctcagcaacatcgggctctatgcgctggtcgcggcc
gggctggtgatgctcaccggcgtgggcggcatgacctccttcggccaagccgcattcgtc
ggcatgggtgcctacgccaccgcgtggatctgcacctcgcccatggccgccgcatggctg
ggcggcgccgtgggccccgcgctgctgccgtgggccgggctgatgctcggcctcgccttc
acctttgcgctggcctgggcgctgggcgcggtcacgctcaagctgcagggccactacctg
ccgctgtgcaccatcgcctggggcctgagcctgtactacctgctcggcaacatggacttc
ctcggcgggcagacgggcatcaccggcgtgccgccattggtgattgccggctactcgctg
gccacgccgcgcgcgctgggcgtggtgatctgggccgtgctgctgctcgcgctgtgggcc
atgcacaacctgctcgactcgcgcgaaggccgggccatccgcgcgctcaagggcggccgg
ctgatggccgagtcgatgggtgtggacaccgcccgccaccgcgtgaagctgttcgtgctg
gctgcgctgctggcggccgtctcgggctggctctatgcgcacctgcagcgcttcgtgaat
ccgacgcccttcaacctgaacatcggcatcgagctgctgttcatggcggtggtgggcggc
gcgggccacctgtggggtgcggtgctgggcgccgcgctcatcacgctgctgaaggaaaag
ctgcaggacgtgctgccatcgctgctgggcagcagcggaaacttcgaagtgatcgtgttc
ggcctgctcatgctgttcgtgctgcagcgctttgcggacggcctgtggcccacgctcgcg
cgcatcgccagccgctgggtgcgcccacatgccccggccgcgagccctaccgcgccggcc
gtgcagctcgcgcaccgcaacctgcccgcccggggcgaggtgctgctgcaggccaccaag
gtcagcaagcgcttcggaggcctggtggccaacaacgacatctcgatgacactgaaggcc
ggcgagatccatgcgctgatcggaccgaacggcgcgggcaagagcaccttcttcaacatg
gtctcgggcgtggacgatccgagcgccggcgaagtgcggctcgcgggccaggcgatgacg
gccaggccctcgcgcgtgttcgccgcgctgggcctgggccgcaccttccagcatgtgcgc
ctgctcggtgcgcgcagcgtggccgagaacgtggcgctcggcgcccacctgcgcgcccgg
cgcggctggctcgccgcgatgctgcggctggaccgcgccgaggaagccgcgctgatggcc
gaggcgcgccgccagatcgagcgctgcggcctcggcgcgcatgccgacacgccggccgca
tcgctctcgctgggccagcagcgcgtggtcgagattgcacgcgcgctggccggccagcct
tcggtgctgctgctcgacgagcccgccgcgggcctgcgccaccttgagaagcgcgcgctt
tcggtgctgctggaccagctgcgcgccgaaggcctgggcatcctcgtggtggagcacgac
atggaattcgtgatgaacctggccgaccgcatcacggtgctcgaattcggcaccgtgatc
gccaccggcacgccggccgaagtgcaggccaatccgcgcgtgctcgaagcctacctgggc
ggtgccgacgacgaactgctggaggacgcaagatga
DBGET
integrated database retrieval system
