Variovorax paradoxus S110: Vapar_1263
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Entry
Vapar_1263 CDS
T00916
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_1263
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_1263
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Vapar_1263
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ACS17914
UniProt:
C5CRI2
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All DBs
Position
1:complement(1376926..1377726)
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AA seq
266 aa
AA seq
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MRKNTQPRAPFLLAITVLVSLFMIAPMLLSVMAGLVNNYSAGLKSGLTLRWLGEVWDNYG
GTVGWSIALALACVVGTVLLGVPCAYALARSRSRAAHIFEELLTLPVAVPGLATALALIL
AYGQLTAFRQSFAFILVGHMVFTLPFMVRTVSSAFQRDDLLALEEAARSLGANFRQRFMG
ILVPAVFPAIVAGSLMVFTLSVGEFNLTWMLHTPLTRTLPVGLADSYASMRIEIGSAYTL
VFFAVILPVLWGLQYLANLMQKRHGT
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaagaacacgcaaccccgggcgcccttcctgctggccatcaccgtgctcgtgagc
ctcttcatgatcgcgccgatgctgctgtcggtgatggcgggcctggtcaacaactacagc
gcgggcctgaagagcggcctcacgctgcgctggctcggcgaggtatgggacaactacggc
ggcaccgtcggctggtcgatcgcgctggcgctggcctgcgtggtgggcaccgtgctgctg
ggcgtgccctgcgcctatgcgctggcgcgcagccgctcgcgcgccgcgcacatcttcgag
gagctgctcacgctgcccgtggcggtgccggggctggccacggcgctggcgctgatcctt
gcctacgggcagctcacggccttccgccagagcttcgccttcatcctggtgggccacatg
gtgttcacgctgccgttcatggtgcgtaccgtgagctcggccttccagcgcgacgacctg
ctcgcgctcgaagaggcggcccgctcgctgggcgcgaacttccgccagcgcttcatgggc
atcctcgtgcccgcggtgttccccgccatcgtggccggcagcctgatggtgttcacgctc
tcggtgggcgagttcaacctcacgtggatgctgcacacgccgctcacgcgcaccctgccc
gtgggcctggccgacagctatgcctcgatgcgcatcgagatcggatcggcctacacgctg
gtcttcttcgccgtgatccttccggtgctgtggggccttcaatatcttgccaacctgatg
cagaaacgccatggaacttga
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