Variovorax paradoxus S110: Vapar_1343
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Entry
Vapar_1343 CDS
T00916
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00550
Peptidoglycan biosynthesis
vap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Vapar_1343
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vap01003
]
Vapar_1343
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vap01011
]
Vapar_1343
Enzymes [BR:
vap01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Vapar_1343
Glycosyltransferases [BR:
vap01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Vapar_1343
Peptidoglycan biosynthesis and degradation proteins [BR:
vap01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Vapar_1343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
ACS17994
UniProt:
C5CRR2
LinkDB
All DBs
Position
1:complement(1459616..1461859)
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AA seq
747 aa
AA seq
DB search
MHRPPFPASRSRLAAALAAIACALPVAAGAVSFDEVKREFRPSDTAVLDRNGELLQRVRT
DASVRRGQWVALADVSPALRMAMVLSEDRRFYEHSGIDWRAVSSAAWGNLWNTRTRGAST
ITMQLSGLLDEDLRRANSGRSFTQKIGQTVAAAQLERSWRKDQILEAYLNTVPFRGEIVG
IDALSRTLFGKAPSGLDAREASVAAALVRAPNAKPALVAQRACEVMRAMEPGQKIDCDAL
DMFTSAAVQRRAFDATEGIAPHAARRVLKELREAGETAAPPSRQAAAAAGKEAAVRTTLR
APLQRFALATLQRHLKELRGRHVEDGALVVLDNASGEVLAWVGSSGPLSQAAEVDAVTAL
RQPGSTLKPLLYAQAIAERRLTAASLIDDSSAQISTASGLYIPQNYDRQFKGPVSARTAL
AASLNVPAVRTLVMVSPESFARQLRAAGLPLRESGDYYGYSLALGSAEVSLLSLANAYRM
LANGGRYGPPTLMARPPVPAPAAPVLDPRAAFIVGDILSDANARTRTFGLDSILSTRFWT
AVKTGTSKDMRDNWAVGWSQRYTVGVWVGNASGASMWDVSGTSGAAPVWAEVMRFLHARE
PSRALRPPAGLVEAQVAFGPGADGNPLEAARSEWFLQGTEQPLFALDSAGTAAGAGAAPR
ITAPADGTIIALDPDIPPLHQRVRFESEGRGVQWRIDGKLFARGNSAQWLPWPGRHVIEL
ADATGKVVDQRKLEVRGAGVVAKSARR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcccgcccttccccgccagccgcagccgccttgccgcagcgctggcggccatc
gcctgcgcgctgccggttgctgccggcgccgtgagcttcgacgaggtgaagcgcgagttc
cgcccttccgacaccgcggtgctcgaccgcaacggcgagctgctgcagcgcgtgcgcacc
gatgccagcgtgcggcgcggccagtgggtggcgctggccgatgtttcgcccgcgctgcgc
atggccatggtgctgagcgaagaccggcgcttctacgagcacagcggcatcgactggcgc
gcggtgtcgtccgccgcctggggcaacctgtggaacacccgcacgcgcggcgcatcgacc
atcacgatgcagctgtcgggcctgctcgacgaagacctgcgccgcgccaacagcgggcgc
agcttcacgcagaagatcggccagaccgtggcagccgcgcagctggagcgcagctggcgc
aaggatcagatcctggaggcctacctcaacaccgtgcccttccgcggcgagatcgtgggc
atcgacgcgctctcgcgcacgctgttcggcaaggcgcccagcggcctggacgcgcgcgag
gccagcgtggccgcggcactggtgcgcgcgcccaacgccaagcccgcattggtggcgcag
cgtgcctgcgaggtgatgcgcgcgatggagccggggcagaagatcgattgcgatgcgctc
gacatgttcacgagcgcggcggtgcagcggcgggccttcgatgcgaccgaaggcattgca
ccgcatgcggcgcggcgcgttctgaaggaactgcgcgaggccggcgaaacggccgcgccg
ccctcgcgccaagcagcagcagcagccggcaaggaggccgccgtgcggaccacgctgcgt
gcgccgctgcagcgctttgcgctggccacgctgcagcgccacctgaaggaattgcgcggc
cgccacgtggaagacggcgcgctcgtggtgctggacaacgcgagcggcgaggtgcttgcc
tgggtcggctcctcgggcccgctgagccaggcggccgaggtcgatgcggtcaccgcgctg
cgccagcccggctccacgctcaagccgctgctctatgcgcaggccatcgccgagcggcgg
ctcacggcggcttcgctgatcgacgattcgtcggcgcagatcagcaccgcgagcgggctc
tacattccgcagaactacgaccgccagttcaaggggccggtgtcggcgcgcaccgcgctg
gccgcctcgctcaacgtgccggccgtgcgcacgctggtgatggtgtcgcccgaatcgttc
gcgcgccagctgcgcgcggccggcctgccgctgcgcgaaagcggcgactactacggctac
agcctggcgctcggcagcgccgaggtgtcgctgctgtcgctcgccaacgcctatcgcatg
ctggccaatggcgggcgctacgggccgcccaccctgatggcgcggcctcccgtgccggcg
ccggctgcgcccgtcctcgatccgcgcgcggccttcatcgtcggcgacatcctgtcggac
gcgaacgcacgcacgcgcaccttcgggctcgacagcattctttccacgcgcttctggacc
gccgtgaaaacgggcaccagcaaggacatgcgcgacaactgggccgtgggctggtcgcag
cgctacacggtcggcgtgtgggtcggcaacgcgagcggtgcgtcgatgtgggacgtgagc
ggcaccagcggcgcggccccggtgtgggccgaggtgatgcgcttcctgcacgcgcgcgag
ccgagccgcgcgctccggccgccggccggcctggtcgaggcgcaggtggcgttcggcccc
ggcgccgacggcaatccgctcgaggcggcgcgcagcgaatggttcctgcagggcacggag
cagccgctcttcgcgctcgacagcgccggcacagcggcaggcgccggggccgcgccgcgc
attaccgcgccggccgacggcaccatcatcgcgctggaccccgacattccgccgctgcac
cagcgcgtgcgcttcgagtccgaaggccgcggcgtgcaatggcgcatcgacggcaagctg
tttgcgcgcggcaacagcgcgcagtggctgccgtggcccgggcgccacgtgatcgaactc
gccgatgccaccggcaaggtggtcgaccagcgcaagctcgaagtgcgcggcgcgggcgtg
gtcgcgaaaagcgcgcgccggtag
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