Variovorax paradoxus S110: Vapar_1428
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Entry
Vapar_1428 CDS
T00916
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00020
Citrate cycle (TCA cycle)
vap00190
Oxidative phosphorylation
vap00650
Butanoate metabolism
vap00720
Other carbon fixation pathways
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
Module
vap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vap_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Vapar_1428
00650 Butanoate metabolism
Vapar_1428
09102 Energy metabolism
00190 Oxidative phosphorylation
Vapar_1428
00720 Other carbon fixation pathways
Vapar_1428
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Vapar_1428
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
GIDA
FAD_oxidored
Pyr_redox_3
ThiF
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ACS18079
UniProt:
C5CSI1
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Position
1:complement(1550571..1552379)
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AA seq
602 aa
AA seq
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MTYTKEQITKRKFDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGVGA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHAMLHTLYQKNVEARTQFFVEWMALDLIRDAEG
DVVGVTALEMETGDLHILQAKTVLLATGGAGRIFQASTNAFINTGDGLGMAARSGIPLQD
MEFWQFHPTGVAGAGVLLTEGCRGEGAILLNSNGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNKDYVLLKLDHLGAETIHKRLPSVYEIGVNFANVDITKEPIPVVPTIHYQ
MGGIPTNINGQVVVQQGEQNSAVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAG
NHIVEFNDKLKEHKPLPADAADRTLERLNRLEAATGGEYAQDVAGEIRAVMQQHAAVFRK
QASMDEGVVKIAAVRERVNAIGLKDKSKVFNTARIEALEVDNLIEVAQATMVSAAARKEC
RGAHTVEDYERPADDPVAPLGRDDANWMKHTLWYSQDNRLSYKPVNLKPLTVDSVPPKVR
TF
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgacctacacaaaagaacaaatcaccaagcgcaagttcgacgtcgtgatcgtcggtgcc
ggcggctccggcatgcgcgcctcgctgcagctggcccgcgcgggcctgaacgtggcggtg
ctctccaaggtgttccccacgcgttcgcacaccgttgcggcccaaggcggcgtgggcgca
tcgctcggcaacatgagcgaggacaactggcactaccacttctacgacacgatcaagggt
tccgactggctcggcgaccaggacgcgatcgagttcatgtgccgcgaagccccgaaggtc
gtgtacgagctcgagcacttcggcatgcccttcgaccgcaaccccgacggcacgatctac
cagcgcccgttcggcggccacacggccaactacggcgagaagcccgtgcagcgcgcctgc
gccgcggccgaccgcaccggccatgcgatgctgcacacgctctaccagaagaacgtcgag
gcccgcacccagttcttcgtcgagtggatggcgctcgacctgatccgcgacgccgaaggc
gacgtggtcggcgtgacggcgctcgaaatggaaaccggcgacctgcacatcctgcaggcc
aagaccgtgctgctggccaccggcggcgcgggccgcatcttccaggcctccaccaatgcc
ttcatcaacaccggcgacggcctgggcatggccgcgcgttcgggcattccgctgcaggac
atggagttctggcagttccacccgaccggcgtggccggcgccggcgtgctgctgaccgaa
ggctgccgcggcgaaggcgcgatcctgctcaacagcaacggcgagcgcttcatggagcgc
tatgcgcccacgctgaaggacctggcgccgcgcgacttcgtctcgcgctcgatggaccag
gaaatcaaggaaggccgcggctgcggccccaacaaggactacgtgctgctgaagctcgac
cacctcggtgccgagaccatccacaagcgcctgccctcggtgtatgaaattggcgtgaac
ttcgccaacgtcgacatcacgaaggagccgatccccgtggtgcccaccatccactaccag
atgggcggcatcccgaccaacatcaacggccaggtcgtggtgcagcagggcgagcagaac
agcgccgtggtgaacggcctctacgcggtgggcgaatgctcctgcgtgagcgtgcacggc
gccaaccgcctgggcaccaattcgctgctcgacctgctggtgttcggccgcgcggccggc
aaccacatcgtcgagttcaacgacaagctcaaggaacacaagccgctgccggccgatgcc
gccgaccgcacgctggagcgcctgaaccgcctcgaggccgccaccggcggcgagtatgca
caggacgtggcgggcgagatccgcgccgtcatgcagcagcacgccgccgtgttccgcaag
caggcctcgatggacgaaggcgtcgtcaagatcgccgccgtgcgcgaacgcgtcaacgcc
attggcctgaaggacaagtcgaaggtgttcaacaccgcgcgcatcgaggcgctcgaagtc
gacaacctgatcgaagtggcgcaggccaccatggtctcggccgccgcccgcaaggaatgc
cgcggcgcgcacacggtcgaggactacgaacgcccggccgacgacccggtcgcgccgctc
ggccgcgacgacgccaactggatgaagcacacgctctggtacagccaggacaaccgcctc
tcctacaagccggtcaacctcaagccgctgacggtcgactccgttcctcccaaggtccgt
acgttctaa
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