Variovorax paradoxus S110: Vapar_1480
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Entry
Vapar_1480 CDS
T00916
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00730
Thiamine metabolism
vap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Vapar_1480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vap03009
]
Vapar_1480
Enzymes [BR:
vap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
Vapar_1480
Ribosome biogenesis [BR:
vap03009
]
Prokaryotic type
GTPases
Vapar_1480
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
GTP_EFTU
MMR_HSR1
ABC_tran
AAA_29
AAA_16
AAA_23
SRPRB
nSTAND1
Septin
AAA_22
P-loop_TraG
DLIC
AAA_30
RsgA_N
AAA_25
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ACS18131
UniProt:
C5CSN3
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All DBs
Position
1:complement(1600120..1601076)
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AA seq
318 aa
AA seq
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MAKPGRTPAKGAGTSARILHDGLVIASHGRHCLVETPTGERLICHPRGKKSQAVVGDRVR
WQASEDEGTIEEVVPRRNLFYRQDEIRTKSFAANLDHVLILIAAEPEFSEHQLARALIAA
EAERITPIIALNKSDLAEPFERAWNKLAPYRRMHHGVLPLSLKASGEADYASLMKLLAGK
STLVLGPSGAGKSTLINLLVPGATALTGEISQALNSGKHTTTSTTWYWVDEARTTSLIDS
PGFQEFGLNHIAPMQLAGLMPDIAEHANDCKFYNCTHLHEPGCGVIANVDAPGKPGPISA
TRYRIYGELFAELSQSRY
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttggctaagccgggccgcactcccgccaagggggccggcacctccgcgcgcattcttcac
gacggcctggtcatcgcgagccacggccgccattgcctggtcgaaacgccaacgggcgag
cgcctgatctgccatccgcgcggcaagaagagccaggccgtggtcggcgaccgcgtgcgc
tggcaggccagcgaagacgaaggcaccatcgaagaagtcgtgccgcggcgcaacctcttc
taccgccaggacgagatccgcaccaagtcgttcgcggccaatctcgaccacgtgctgatc
ctgatcgcggccgagccggagttctcggagcatcagctcgcgcgcgcgctcattgccgcc
gaagccgaacgcatcacgccgatcatcgcgctcaacaagagcgatctggccgagcccttc
gagcgcgcatggaacaagctcgcgccctaccggcgcatgcaccatggcgtgctgccgctc
tcgctcaaggcgtcgggcgaagccgactacgcatcgctcatgaagctgctggctggcaag
agcacgctggtgctgggcccctcgggcgccggcaagagcacgctcatcaacctgctggtg
cccggtgccaccgcattgaccggcgagatctcgcaggcgctgaattcgggcaagcacacc
accaccagcaccacctggtattgggtggacgaggcgcgcaccaccagcctgatcgattcg
ccgggcttccaggaattcggcctcaaccacatcgcgccgatgcagctcgcgggcctgatg
cccgacattgccgagcatgcgaacgactgcaagttctacaactgcacccatctgcacgaa
ccgggctgcggcgtgatcgcgaacgtggatgcgcccggcaagccagggccgatcagcgcc
acgcgctacaggatctacggcgaactcttcgccgagctcagccagtcgcgctactga
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