Variovorax paradoxus S110: Vapar_1519
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Entry
Vapar_1519 CDS
T00916
Name
(GenBank) type II and III secretion system protein
KO
K02280
pilus assembly protein CpaC
Organism
vap
Variovorax paradoxus S110
Pathway
vap02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Vapar_1519
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vap02044
]
Vapar_1519
02035 Bacterial motility proteins [BR:
vap02035
]
Vapar_1519
Secretion system [BR:
vap02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
Vapar_1519
Bacterial motility proteins [BR:
vap02035
]
Pilus system
Pilus assembly proteins
Vapar_1519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
BON
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-ProteinID:
ACS18170
UniProt:
C5CT45
LinkDB
All DBs
Position
1:1639741..1641255
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AA seq
504 aa
AA seq
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MQHLSSSSYSPAWLLAALMALAAPAMAADAVPAAAAAVAATPAAAPAGPATRRCTAIIPD
DQPTYAVLGKSVVIPLKARVARIVVSGQPPSRAPAAAPAAAGQPAPAPATAANAGDGIAD
VDVTLLSPTDLFFRGRQAGSMNVVLQSVDGTCYIKDVIVTIDPGALQSKLAELMPEENHI
RVRSAEKSIVLTGEISDALKLDDVMSLAMAYGADGKKVVNLLRVTAPQQVMLEVKIAEVS
KTLLDRLGARVGLSRTGGGGRDSYSLISSFLSGGGGLLEAIRIGRTSVGIDGQKDDGLVR
ILAEPNIMAISGQQASFLSGGKIFIPVAQSAAGGGGTNITLEEKEFGIGVKFTPTVLNGG
RVNLKMISEVSDLSQTGSPFTTVTGVTAVLPSLTVRRADTTVQLNDGQSFVIAGLIKSNV
TESIKRYPGLGEVPVMGALFRSTEFQNDQTELMFVITPRLVRPLAEAPRVPTDNHVVPSR
AEVYLNGSLESATPAPVAPAGQPQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacatctctcttcttcttcttattcacccgcctggctgctggcggcactcatggcg
ctggcggcacccgcgatggccgcggacgcggtcccggcggcggcggctgccgttgccgca
accccggccgcagcgccggccgggcccgccacccggcgctgcaccgcgatcatcccggac
gaccagccgacctacgccgtgctcggcaagtcggtggtcatcccgctgaaggcacgcgtt
gcgcgcatcgtggtcagcggccagccgcccagccgcgcgccggccgcagcacccgcagcc
gcagggcagccggcaccggcccccgccacggcggcgaacgcgggcgacggcatcgccgat
gtcgacgtcacgctgctgagcccgaccgacctgttcttccgcggccgccaggcgggctcg
atgaacgtcgtgctgcaaagcgtcgacggcacctgctacatcaaggacgtgatcgtcacc
atcgatccgggcgcgctgcagtccaagctcgccgaactgatgccggaagaaaaccacatc
cgcgtgcgcagcgccgagaaatcgatcgtgctcaccggcgagatcagcgatgcgctcaag
ctcgacgacgtgatgagcctggccatggcctacggcgccgacggcaagaaggtggtgaac
ctgctgcgcgtgacggcgccgcagcaggtgatgctcgaagtgaagatcgcagaggtcagc
aagacgctgctggaccggctcggcgcgcgcgtgggcctgagccgcacgggcggtggcggc
cgcgacagctactcgctgatctccagcttcctgagcggaggcggcggcctgctcgaggcg
atcaggatcggccgcacctcggtcggcatcgacggccagaaggacgacggcctggtgcgc
atcctggcggagcccaacatcatggccatcagcggccagcaggcgagcttcctgtcgggc
ggaaagatcttcatcccggtcgcgcagagcgccgccggcggcgggggaaccaacatcacg
ctggaggagaaggagttcggcatcggggtcaagttcaccccgaccgtgctcaacggcgga
cgcgtcaacctcaagatgatctcggaggtgtcggacctgtcgcagaccggctcgcccttc
accaccgtgaccggcgtgaccgccgtgctgccttcgctgacggtgcgccgcgccgacacc
accgtgcagctcaacgacggccagagcttcgtcatcgcggggctcatcaagagcaacgtc
accgaatccatcaagcgctaccccggactgggcgaagtgccggtgatgggggctctgttc
cgcagcaccgagttccagaacgaccagaccgaactgatgttcgtgatcacgccgcgcctg
gtgcgcccgctggccgaggccccccgtgttccaaccgacaaccacgtcgttcccagccgc
gccgaggtctacctgaacggcagcctcgaaagcgccaccccggcaccggttgcaccggcc
ggccaaccccaatga
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