Variovorax paradoxus S110: Vapar_1571
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Entry
Vapar_1571 CDS
T00916
Name
(GenBank) deoxyxylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00730
Thiamine metabolism
vap00900
Terpenoid backbone biosynthesis
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Vapar_1571
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Vapar_1571
Enzymes [BR:
vap01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
Vapar_1571
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_N
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
ACS18222
UniProt:
C5CT97
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All DBs
Position
1:1697589..1699487
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AA seq
632 aa
AA seq
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MNNSQMDKKTHDDPMAALLPTLHDPSPIRQFDRAQLKQLAAEVRACVLDNVSRTGGHLSS
NLGTVELTVALHHVFNTPHDRLVWDVGHQTYPHKILTGRRERMPTLRQIGGISGFPQRSE
SEYDTFGTAHSSTSISAALGMAMAAKQKGEDRHSVAIIGDGALTAGMAFEALNNAGVCDC
KLLVILNDNDMSISPPVGALNRYLAQLMSGNFYAAAKNVGKSVLRAAPPLFELAKRFEQH
AKGMVVPATLFEQFGFNYVGPIDGHDLDSLVPTLENLKHLDGPQFLHVVTKKGQGYKLAE
ADPVAYHGPGKFDPQVGLVKPTAVAKQTFTQVFGQWLCDMAAHDGRLVGITPAMREGSGL
VEFEQRFPDRYYDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNL
PVVFALDRAGLVGADGATHAGAYDIPFLRCIPNMSIACPADERECRQLLSSAYEQNHPVA
VRYPRGAGAGVVPHLALDALPFGKGEVRREGKRIAILVFGTLLYPALTAAESLDATVVNM
RWAKPLDVELLLKVAGTHEAIVTLEEGAVMGGAGSAVLEALQAANVQKPVLQLGLPDRFI
EHGDPGKLLASIGLDAAGIAASITQRFGAAAG
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactcacagatggacaagaagacccacgacgatcccatggctgcgctgcttccc
acgcttcacgatccatcgccgatccgccagttcgaccgcgcccagctcaagcagctggcg
gccgaggtgcgcgcctgcgtgctcgacaacgtctcgcgcaccggcggccacctgagctcg
aacctcggcacggtcgagctcacggtcgcgctgcaccacgtgttcaacacgccgcacgac
cgcctggtgtgggacgtgggccaccagacctatccgcacaagatcctcacgggccggcgc
gagcgcatgcccacgctgcggcagatcggcggcatctcgggctttccgcagaggagcgag
agcgaatacgacaccttcggcaccgcgcactcgtcgaccagcatctcggccgcgctcggc
atggcgatggcggccaagcagaagggcgaggaccgccattccgtggccatcatcggcgac
ggcgcgctcacggccggcatggccttcgaggcgctcaacaacgccggcgtgtgcgactgc
aagctgctggtgatcctgaacgacaacgacatgtcgatcagcccgcccgtgggcgcgctc
aaccgctacctcgcgcagctgatgagcggcaacttctacgccgcggccaagaacgtcggc
aagagcgtgctgcgcgcggcgccgccgctgttcgagctggccaagcgcttcgagcagcat
gccaagggcatggtggtgcccgccacgctgttcgagcagttcggcttcaactacgtcggc
cccatcgacggccacgacctcgattcgctggtgcccacgctcgagaacctcaagcacctg
gacggcccgcagttcctgcacgtggtcaccaagaaggggcagggctacaagctggccgag
gccgacccggtggcctaccacgggcccggcaagttcgatccgcaggtggggctggtcaag
cccaccgcggtggcaaagcagaccttcacgcaggtcttcggccaatggctctgcgacatg
gccgcgcacgacggccggctggtgggcatcacgccggccatgcgcgaaggctcggggctg
gtcgagttcgaacagcgctttcccgaccgctactacgacgtcggcattgccgagcagcat
gccgtcaccttcgcggcgggcctggcctgcgagggcctgaagccggtggtggcgatctac
tcgaccttcctgcagcgcgcctacgaccagctgatccacgacgtcgcgatccagaacctg
ccggtggtgttcgcactcgaccgcgccggcctcgtgggtgccgatggcgccacgcatgcg
ggcgcctacgacattccgttcctgcgctgcattcccaacatgagcatcgcctgcccggcc
gacgagcgcgagtgccgccagctgctgtcgagcgcctacgagcagaaccacccggtggcc
gtgcgctatccgcgcggcgccggtgcgggcgtggtgccgcacctcgcgctcgacgcgctg
ccgttcggcaagggcgaagtgcgccgcgagggcaagcgcatcgccatcctcgtattcggc
accctgctgtaccccgcgctcacggcggccgaatcgctcgatgccacggtggtcaacatg
cgctgggccaagccgctggacgtcgagctgctgctgaaggtggcgggcacgcacgaggcc
atcgtcacgctcgaagagggcgccgtcatgggcggcgcgggcagcgcggtgctcgaggcg
ctgcaggccgcgaatgtgcaaaagccggtgctgcagctgggcctgcccgaccgcttcatc
gagcatggcgatccgggcaagctgctcgcatcgatcgggctcgatgcggccggcattgct
gcctcgatcacccagcgcttcggcgccgccgcagggtaa
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