Variovorax paradoxus S110: Vapar_1572
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Entry
Vapar_1572 CDS
T00916
Name
(GenBank) TRAP dicarboxylate transporter-DctP subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Vapar_1572
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_1572
Transporters [BR:
vap02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Vapar_1572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
ACS18223
UniProt:
C5CT98
LinkDB
All DBs
Position
1:1699600..1700682
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AA seq
360 aa
AA seq
DB search
MDRRSLIKNAGIAGVLAAGIAPAVHAQAAVRWRLASSFPKSLDTIYGGAEVFAKAVKAMS
GGKFEISVHAGGELMPPFGVVDGVQNGSVEMCHTVPYYFYGKNPAFALGSAIPFGLNSRQ
MTAWMMHGNGRKLMNEFYAKYSMVSFAGGNTGCQMGGWFRKEIKSVADFKGMKMRLGGGL
IGEVMQKMGAVPQSLPGGEIYQALEKGTIDAAEWVGPYDDQKLGFNKVAPFYYYPGWWEG
GPEVDFFINQKAMDGLSAENKAIVEAAAAVASSDMLAKYDALNPIALKQLVAAKTKVLPF
SQAMMDAAYKASLEVYAENDAKSPEWKKIYADFRSFQRDQVLWFRFAESRFDSFMSTLKL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtcgttccctcattaaaaacgccggcattgcgggcgttctggccgccggcatt
gcgcccgcagttcatgcgcaggcggccgtccgctggcgcctggcgtcgagctttcccaag
tcgctcgacaccatctacggcggcgcggaagtcttcgccaaggcggtcaaggccatgtcg
ggcggcaagttcgaaatctcggtccatgccggcggcgagctgatgcctcccttcggcgtg
gtggacggcgtgcagaacggttcggtcgagatgtgccacaccgtgccttactacttctac
ggcaagaaccccgcgttcgcgctgggctcggccattccgttcggcctgaactcgcgccag
atgaccgcgtggatgatgcacggcaacggccgcaagctcatgaacgagttctacgccaag
tacagcatggtgagcttcgccggcggcaacacgggctgccagatgggcggctggttccgc
aaggaaatcaagtccgtggcggatttcaagggcatgaagatgcgcctgggcggcggcctg
atcggcgaggtcatgcagaagatgggcgccgtgccgcaaagcctgccgggcggcgagatc
taccaggcactcgaaaagggcaccatcgatgccgccgagtgggtgggtccgtacgacgac
cagaagctcggcttcaacaaggtggcgccgttctactactaccccggctggtgggaaggc
ggtccggaagtggacttcttcatcaaccagaaggccatggacggcctctcggccgagaac
aaggccatcgtggaagccgccgcggccgtggcctcgtcggacatgctggccaagtacgac
gcgctcaacccgatcgcgctcaagcagctcgtggccgccaagaccaaggtgctgccgttc
tcgcaagccatgatggacgccgcctacaaggcttcgctcgaggtctatgccgagaacgac
gccaagagccccgagtggaagaagatctacgccgacttccgcagcttccagcgcgaccag
gtgctctggttccgttttgcggaatcgcgcttcgactcgttcatgtccacgctcaagctc
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