Variovorax paradoxus S110: Vapar_1579
Help
Entry
Vapar_1579 CDS
T00916
Name
(GenBank) transcriptional regulator, LysR family
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_1579
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Vapar_1579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ACS18230
UniProt:
C5CTA5
LinkDB
All DBs
Position
1:1708828..1709775
Genome browser
AA seq
315 aa
AA seq
DB search
MQVKAKAQNSARNRAVLGQLSDMDLRLLKVFKSVVDCGGMAAAELELNIGTSTVSRHVKD
LETRLGLVLCRRGRAGFALTAEGQRVYDETLRLLASVDAFRGSIDDIHNRMGGQLDVALF
DKTATNPKARIGEAIARFTELAPEVNLAVHVGSINAIEQGVLEGNFQIGIIPAHRASKSL
VYADLFDETMLLYCGKGHLLFESNNAKLTWARLREHHFAGLGYHSPNMELSHRAKLSRKA
TGFDQEAIATLILSGRFLGFLPDHYAQVFEERGLMKPVLPARFNYACRFVSLLRRSPKPS
RAVLAFQECLEKAHK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaaggcgaaagcccaaaacagtgcccgcaatcgcgccgtgctggggcagctc
agcgacatggacctgcgcctgctcaaggtgttcaagagcgtggtcgactgcggcggcatg
gcggcggccgagctggagctcaacatcggcacctccaccgtgagccggcacgtgaaggac
ctggaaacgcggctcggcctggtgctgtgccggcgcggccgcgcgggctttgcgctcacg
gccgagggccagcgcgtgtacgacgagacgctgcgcctgctggcctcggtcgatgccttt
cgcggcagcatcgacgacatccacaaccgcatgggcggccagctcgacgtggcgctgttc
gacaagacggcgaccaatccgaaggcgcgcatcggcgaagccatcgcgcgcttcaccgaa
ctggcgccggaggtgaacctggcggtgcatgtgggctcgatcaacgccatcgagcagggc
gtgctggaaggcaatttccagatcggcatcatcccggcgcaccgggcctcgaagagcctg
gtgtacgccgacctgttcgacgagacgatgctgctttactgcggcaaggggcatctgctc
ttcgagagcaacaacgcaaagctcacgtgggccaggctgcgcgagcatcactttgcgggc
ctgggctaccactcgcccaacatggaactgagccatcgcgcgaagctgtcgcgcaaggcg
acgggcttcgaccaggaagcgattgccacgctgattctttcggggcgctttctcggtttt
ttgcctgaccactacgcgcaggtgttcgaggagcgcgggctcatgaagcccgtgctgccg
gcgcggttcaactacgcgtgccggttcgtgagtttgctgcgccggtcgcccaagccgtca
cgggcggtgctggcgtttcaggagtgtctggagaaggcgcacaagtaa
DBGET
integrated database retrieval system
