Variovorax paradoxus S110: Vapar_1735
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Entry
Vapar_1735 CDS
T00916
Name
(GenBank) Substrate-binding region of ABC-type glycine betaine transport system
KO
K05845
osmoprotectant transport system substrate-binding protein
K05846
osmoprotectant transport system permease protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_1735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_1735
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Osmoprotectant transporter
Vapar_1735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ACS18385
UniProt:
C5CU35
LinkDB
All DBs
Position
1:complement(1866939..1868468)
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AA seq
509 aa
AA seq
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MLRAALLFLAMAWLGAAASAQPGEGTLRVGSKRFTESYILAELLAQTAAPHTASPPVVRQ
GLGNTAIVYEALRSGAIDLYAEYTGTIALEILKGSPAETREAMNAALAPMGLGVAIPLGF
NDGYALAVRAADAERLGLRTLSDLAKHPELKLGLSNEFLGRADGWKGLAARYGFTQAPTG
LDHGLAYEAVAAKQIDAIDIYTTDAKIEHLGLRVLEDDRKYFPRYDAVVLYRLDLPTRLP
QAWAALKTLEGRIDEHAMIAMNARAELQSVPFDTIARDFLAGAGQGAKTQEPRRGFSAKL
FGPDLWQLARQHLVLVAVSVGVAILIGVPLAILVFPHVRLRALVLGFASLLQTVPSLALL
AVLISMLGAIGALPALIALTLYSLLPIMRNTVTGLAEVPNGLRLAGTALGMTPPQSLRLV
LLPLALPTLLAGVRTATAIAIGTATIAAFIGAGGFGERIVTGLALNDRELLLAGALPAAA
LALLSEGIFELVEMLMRRRRRAPPPSLLP
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcgccgccttgttgttccttgccatggcctggctcggtgccgctgcatcggcg
cagcccggcgagggcacgctgcgcgtcggttccaagcgcttcaccgagtcgtacatcctg
gccgaactgctcgcgcagaccgcggcgccccacaccgcatcgccgccggtggtgcgccag
ggcctcggcaacacggccatcgtgtacgaggcgctgcgttcgggtgccatcgatctctat
gccgaatacaccggcaccatcgcgctcgaaattctcaagggttcgccagccgaaacgcgc
gaggccatgaacgcggcgctggcgcccatgggcctgggcgtggcgattccgctgggcttc
aacgacggctatgcactggccgtgcgggcggccgatgccgagcggctcgggctgcgtacg
ctgagcgatcttgcaaagcatcccgaactcaagctcggcctgtcgaacgaattcctcggc
cgcgccgacggctggaagggcctggccgcgcgctacggcttcacccaggcgcccaccggc
ctcgaccatggcctggcctacgaagccgtggccgcgaagcagatcgacgcgatcgacatc
tacaccaccgacgccaagatcgagcatctcggcctgcgcgtgctcgaagacgacaggaaa
tactttccgcgctacgacgccgtggtgctctacaggctcgacctgcccacgcggctgccc
caggcctgggccgcgctgaaaacgctcgaaggccgcatcgacgaacacgcgatgatcgcg
atgaatgcgcgcgccgaactccagagcgtgcccttcgacaccattgcgcgcgacttcctg
gccggcgcaggccagggcgcaaagacccaggagccccggcgcggcttcagcgccaagctg
ttcggccccgatctctggcagctcgcgcggcagcacctggtgctggtcgccgtatcggtg
ggcgtggcgatcctgatcggcgtgccgctcgcgatcctggtgtttccgcatgtgcggctg
cgcgcgctggtgctcggcttcgcgagcctgctgcagaccgtgccttcgctcgcgctgctg
gccgtgctgatttccatgctcggtgcgatcggcgcgctgcccgcgctgatcgcgctcacg
ctctattcgctgctgccgatcatgcgcaacaccgtgacgggcctggccgaagtgccgaac
ggcctgcgcctggccggcaccgcgctgggcatgacgccgccgcagagcctgcggctggtg
ctgctgccgctggcactgcccacgctgctggcgggcgtgcgaacggccaccgccattgcc
attggcaccgcgaccatcgcggccttcatcggcgcaggcggattcggcgagcgcatcgtc
acggggctggcgctcaacgaccgcgagctgctgctggccggcgcgctgccggccgcggcg
ctggcgttgctgagcgaggggatcttcgagctcgtggagatgctgatgcgccgccggcgc
cgggcgccgccgccttcgcttctcccatga
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