Variovorax paradoxus S110: Vapar_1742
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Entry
Vapar_1742 CDS
T00916
Name
(GenBank) transcriptional regulator, TetR family
KO
K23777
TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_1742
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Vapar_1742
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GFIT
Motif
Pfam:
TetR_N
CecR_C
Motif
Other DBs
NCBI-ProteinID:
ACS18392
UniProt:
C5CU42
LinkDB
All DBs
Position
1:1876476..1877183
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AA seq
235 aa
AA seq
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MATRSSTTRSPAAREGASRTQRTDGSTTRLHILETAAQLFAERGFAESTSKEICTRAGTN
MAAVNYHFGSRDGLYEAVLIEAHRQLVSMDELISLASEAGDPRLKLRAFLTHLVEMGSQP
KAPWGFRVVLREALSPSPALPALIRQAVLPKARLIRGLIGGIMGLPEDHPSVQRGLLFAV
LPCIVMTVAPKDLASKVLPALKDAEGLADDLMRYVFAGLDAIAKEAAPVKAGRRR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacgctcttccaccacccgctcccccgccgcgcgcgagggcgcgtcgcgcacc
cagcgcaccgacggcagcaccacgcgcctgcacatcctcgaaaccgcggcccaactgttc
gccgagcgcggcttcgccgagagcaccagcaaggaaatctgcacgcgcgccggcaccaac
atggcggcggtcaactaccacttcggcagccgggacgggctctacgaggccgtgctgatc
gaggcgcaccgccagctcgtgagcatggacgagctgatcagcctggccagcgaggccggc
gatccgcggctcaagttgcgcgccttcctcacgcacctggtcgagatgggcagccagccc
aaggcaccctggggctttcgcgtggtgctgcgcgaggcgctgtcgccgtctccggcgctg
cccgcgctgatccgccaggcggtgctgcccaaggcccggctgatccgcggcctgatcggc
ggcatcatgggcctgcccgaggaccatccctcggtgcagcgtggcctgctgttcgcggtg
ctgccctgcatcgtgatgacggtggcacccaaggacctggcgagcaaggtgctgccggcg
ctgaaggatgccgagggcctcgcggacgacctgatgcgctacgtgttcgcgggcctcgac
gccatcgcgaaggaggcggcgcccgttaaagctggaaggcgacggtga
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