Variovorax paradoxus S110: Vapar_1795
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Entry
Vapar_1795 CDS
T00916
Name
(GenBank) histone family protein nucleoid-structuring protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vap03036
]
Vapar_1795
03400 DNA repair and recombination proteins [BR:
vap03400
]
Vapar_1795
Chromosome and associated proteins [BR:
vap03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
Vapar_1795
DNA repair and recombination proteins [BR:
vap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Vapar_1795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS
Histone_HNS_N
Phage_scaffold
TMF_DNA_bd
HH_AprE
V-SNARE
HB_LcnD
FlxA
Tho2
AAA_13
DosC_2nd
DivIC
Motif
Other DBs
NCBI-ProteinID:
ACS18445
UniProt:
C5CUL7
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All DBs
Position
1:1931812..1932156
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AA seq
114 aa
AA seq
DB search
MASTLADINSQIKKYDEQIAQLRKQAEDLRNQERAGVIEDVRRKIAEYGLTASDLKLSAR
GGSVKRSAGVPAVKAAAKYRGPTGETWSGGRGRKPRWVTEALAAGKSLSEFEIK
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgacccttgccgatatcaattcccagatcaagaagtacgacgagcagattgcg
caattgcgcaagcaggccgaagaccttcgcaaccaagagcgcgcgggcgtgattgaagat
gtgcgccggaagatcgctgaatacggcctgactgcgtcggacctgaaactcagtgcacgc
ggcggctcggtcaagcgcagtgcaggggttcccgcggtcaaggcagcagccaaataccgt
ggtccgaccggagaaacctggtctggcggccgcggccgcaagccgcgttgggtcaccgaa
gcactggccgcaggcaagtcgctttccgagttcgagatcaagtaa
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