Variovorax paradoxus S110: Vapar_1808
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Entry
Vapar_1808 CDS
T00916
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16090
catecholate siderophore receptor
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_1808
Transporters [BR:
vap02000
]
Other transporters
Pores ion channels [TC:
1
]
Vapar_1808
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ACS18458
UniProt:
C5CUN0
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All DBs
Position
1:1942712..1944931
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AA seq
739 aa
AA seq
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MLPFGALMLAASVSSWAQTPEAPVQGGTLGTVTVTEQAEVQGKDQVQTRKTNIGKGTQDI
RDIPQSINVITEKLIDDVKLDTLKDALHYSAGITFAATENGTDQDIRLRGFPIASTGDLM
IDGMRDPSQYDRDTFNLDRVEVMRGSASMLFGRGSTGGVVNQVSKRPLLADQTDVVGTLG
SGGYFRTTADFNVRTGETSALRINAMYNKADNGGAKIDKYGIAPSYSWGLGTADEFTVGL
FHLKNNNVPMSAVRYVNGSLAPVKPGNFYGTSADFVDGEANYVHGAWKHRFANGGELRTQ
LRSGVFERAQWSTAVGACGALPTAAGTCPAGTRAVTALDPSTFLTRSSLTPRKDRYKGTY
AQSDYSLAFDALGVKHELLAGIDASKEEAVRFQNNGSTLGIRPPTRVGTPDDGAGLVGTG
LSPQWRNSSNYDAKAYGLYVQDLVQVAPHWKVLGGIRYDSFKGDFEQLNYRTGAVSSTPL
SVTSTHLSNSPWSYRGGVMYQPSDSQSYYVSYGTSFNTSADTYQYVTPQNANTPPEKSRN
LEVGAKLDWLDGALSTRGAIFRTEKYNERTTDADFAGSAYTLSGKRHTAGVELDVVGRLG
RQWEVYASYTWMPVAKIDQAGSAAAAQASVGQRVGLTPKQSGAVWVSYQATPKLRVALGA
HGATENRPLTGTTGAASATARVPGYVVADAMLEYKFTPDVYAQININNLSNKAYGDQLYP
GFAILGAKRQVLGTVGVRF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctttcggcgcattgatgctggccgcctctgtcagcagttgggcgcagacgcct
gaagccccggtgcagggcggcacgcttggaaccgtgacggtgaccgagcaggccgaggtc
cagggcaaggaccaggtccagaccaggaaaaccaacatcggcaagggaacgcaggacatc
cgcgacattccgcaatcgatcaacgtcatcaccgaaaagctgatcgacgacgtcaagctc
gacacgctgaaggacgccttgcactattcggcgggcatcacctttgccgcgaccgagaac
ggcaccgaccaggacatccggctgcgcggcttcccgatcgccagcaccggcgacctgatg
atcgacggcatgcgcgacccctcgcagtacgaccgcgacaccttcaacctcgaccgcgtc
gaagtgatgcgcggctcggcctccatgctcttcggccgcggctccacgggcggcgtcgtg
aaccaggtgagcaagaggccgctgctggccgaccagaccgacgtcgtgggtacgctgggc
agtggcggctactttcgcaccaccgccgatttcaacgtgcgcaccggcgagacctcggca
ctgcgcatcaacgcgatgtacaacaaggccgacaacggcggcgcgaagatcgacaagtac
ggcatcgcaccctcgtacagctggggcctggggaccgcggacgaattcaccgtgggcctg
ttccacctgaagaacaacaacgtgccgatgtcggccgtgcgctacgtcaacggcagcctg
gcgccggtcaagcccggcaacttctacggcacctcggcggacttcgtcgacggcgaggcg
aactacgtgcacggcgcatggaagcacaggttcgccaacggcggcgaactgcgcacccag
ttgcgcagcggcgtgttcgagcgggcgcaatggagcacggcggtgggcgcctgcggcgcg
cttcccacggcggctggaacctgcccggccggcacccgggcggtcacggcgctcgatccg
tcgaccttcctcacgcgcagcagcctcacgccgcgcaaggaccgctacaagggcacctac
gcgcagagcgactacagcctggccttcgatgcgctcggcgtgaagcatgagctgctggcc
ggcatcgatgcctcgaaggaggaggccgttcgcttccagaacaacggcagcacgctcggc
atccgtccgcccacgcgcgtcggtacgcccgacgacggagctggcctggtcggcactggc
ctgtcgccgcaatggcgcaattcgagcaactacgacgcgaaggcctacggcctctacgtg
caggacctggtccaggtcgcgccgcactggaaggtgctcggcggcattcgctacgacagc
ttcaagggtgacttcgagcagctgaactaccgcactggcgcagtgagcagcacgccgctg
agcgtcaccagcacgcatttgtcgaactcgccgtggagctaccgcggcggcgtgatgtac
cagccctccgattcccagtcgtactacgtgtcgtacggcacctcgttcaacacctcggcc
gacacctaccagtacgtcacgccgcagaacgccaacacgccgcccgagaagagccgcaac
ctcgaagtgggtgccaagctcgactggctggacggcgcgctctccacgcgcggcgcgatt
ttccgcaccgagaagtacaacgagcgcaccaccgatgccgactttgccggctcggcctac
acgctctcgggcaagcggcataccgcaggcgtcgagctcgacgtggtcggccgcctgggc
cggcagtgggaggtctacgcttcgtacacctggatgccggtcgccaagatcgaccaggcc
ggcagcgcggctgcggcgcaggcctcggtcggccagcgcgtgggtctcacgcccaagcag
tcgggtgcggtctgggtcagctaccaggcaacgccgaagctgcgcgtcgcactgggcgcg
catggcgcgaccgagaaccggccgctgacgggcaccaccggcgccgcgtcggcgaccgcc
cgcgtgccgggctatgtcgtggccgatgcaatgctcgaatacaagttcacgccggacgtg
tacgcgcagatcaacatcaacaacctcagcaacaaggcctacggcgatcagctgtatccg
ggctttgccatcctgggcgccaagcgccaggtgctcggcacggtcggcgtgcgcttctga
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