Variovorax paradoxus S110: Vapar_1897
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Entry
Vapar_1897 CDS
T00916
Name
(GenBank) aliphatic sulfonate ABC transporter periplasmic ligand-binding protein
KO
K15553
sulfonate transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap00920
Sulfur metabolism
vap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Vapar_1897
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_1897
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_1897
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Sulfonate transporter
Vapar_1897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMT1
NMT1_2
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
ACS18546
UniProt:
C5CV97
LinkDB
All DBs
Position
1:2028956..2029927
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AA seq
323 aa
AA seq
DB search
MSDLSSRRRLLRGAVAATAASALPRFSFAQGSGQVLRLGYIGPGKKPAAATGWALRQGHL
LRELAPLGFKEVTTRNFPNGPDLNEAFLSGALDVGIYGDTPAVVARSRGLEGQLIGFDAV
GMNVWLLTPRDGVRSVKALEGQSIGVARGSYMHRYVLGLLKENGLQKSVKVIHMFPRDGE
AALDQGSIAAFAAQVDVGPLLASRGYPVIDEAEKHPALRGTSVIVASSKLLAAAPGLPAA
WTRARRTALQEIRRNSVDYYAFHSEVSGFPLEIVKISHPLSHFPEAAYPPEGLALLDEVK
KFLLAENLVSRDFALAQWRAQED
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctctccagccgccgccggttgctgcgcggcgccgttgccgcaaccgccgcg
agcgcattgccccgtttctcctttgcgcagggcagcggccaggtgctgcgtctcggctac
atcggccccggcaagaagcccgcggccgccaccggctgggcgctgcgccagggccacctg
ctgcgcgagctggccccgctcggtttcaaggaagtgacgacgcgcaattttccgaacggg
cccgatctcaacgaggcttttctttcgggcgcgctcgatgtcggcatctacggcgacacg
cccgccgtggtggcccgctcgcgcggcctcgaaggccagctcatcggtttcgacgcggtg
ggcatgaacgtctggctgctcacgccgcgcgacggcgtgcgcagcgtgaaggcgctcgaa
ggccagtccatcggcgtggcgcgcggctcctacatgcaccgctacgtgctgggcctgctc
aaggagaacgggctgcagaaatccgtcaaggtgatccacatgttcccgcgcgacggcgag
gcggcgctcgaccagggctcgatcgcggccttcgcagcgcaggtcgacgtgggaccgctg
ctcgcttcgcgcggctatccggtcatcgacgaggccgagaagcacccggcgctgcgcggc
acctcggtgatcgttgcgtcgagcaagctgctggcggccgcgcccggactgcctgcggcc
tggacgcgcgcacgccgcacggcgctgcaggagatccggcgcaacagcgtggactattac
gcctttcactcggaggtgagcggctttccgctcgagatcgtgaagatctcgcacccgctc
tcccacttccccgaggccgcgtatccgcccgaaggcctggcgctgctggacgaggtcaag
aagttcctgctcgccgagaacctcgtgagccgcgacttcgcgctcgcgcaatggcgcgcc
caggaagactga
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