Variovorax paradoxus S110: Vapar_1948
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Entry
Vapar_1948 CDS
T00916
Name
(GenBank) TRAP dicarboxylate transporter, DctP subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Vapar_1948
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_1948
Transporters [BR:
vap02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Vapar_1948
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
ACS18595
UniProt:
C5CVE6
LinkDB
All DBs
Position
1:complement(2086928..2087956)
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AA seq
342 aa
AA seq
DB search
MTSLTRLNRRGALRTLSALPAAGIVSAVPRIARAAEFSYKYGNNLPLSHPLNIRAQEAAD
RIAKESKGRVEIKIFPNNQLGGDTDMLAQVRSGGIEFFTPSALVIATLVPVAAINAVGFA
FNDYSQVWGAMDGKLGAHVRGAIAKSRLYAFEKMWDNGFRQTTSSKAPVTSAKDMDGLKI
RVPVSPLSISMFKGLGAAPASLQFSEVYSALQTKIVDAQENPLPIIQVAKLFEVQKFCSL
TNHIWDGYWFIANGRAWEALPDDLKTIVARAINDAGMQQREDIKKLNESVVGDLQAKGLS
INRPVAESFRAKLRESGFYGEWKGRFGPEAWALLEGAVGKLA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgctcactcgcctgaaccgccgcggtgccttgcgcacgctttccgccctcccc
gccgccggcatcgtgtcggccgtgccgcgcatcgcgcgcgccgcggagttctcgtacaag
tacggcaacaacctgccgctcagccatccgctgaacatccgcgcgcaagaggcggccgac
cgcatcgccaaggaaagcaagggccgggtcgagatcaagatctttcccaacaaccagctc
ggcggcgacaccgacatgctggcacaggtgcgctcgggcggcatcgagttcttcacgccc
tcggcgctggtgattgccacgctggtgccggtggccgccatcaacgcggtgggcttcgcg
ttcaacgactacagccaggtgtggggcgccatggacggcaagctcggcgcgcatgtgcgc
ggcgccattgccaagtcgcgcctctatgctttcgagaagatgtgggacaacggctttcgc
cagaccaccagcagcaaggcgccggtcaccagcgccaaggacatggacggcctgaagatc
cgcgtgcccgtgagcccgctgtcgatctcgatgttcaagggcctgggcgccgcgcccgcg
agcctgcagttcagcgaggtgtactcggccctgcagaccaagatcgtcgatgcgcaggaa
aacccgctccccatcatccaggtggccaagctgttcgaggtgcagaagttctgctcgctc
accaaccacatctgggacggctactggttcattgccaacggccgcgcatgggaggcactg
cccgacgacctcaagaccatcgtggcgcgcgccatcaacgacgccggcatgcagcagcgc
gaagacatcaagaagctcaacgagtcggtggtcggcgacctgcaggccaagggcctcagc
atcaaccgcccggtggccgagagctttcgcgccaagctgcgcgaatcgggcttctacggc
gagtggaagggccgcttcggccccgaggcgtgggcgctgctcgaaggcgccgtcggcaag
ctggcctga
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