Variovorax paradoxus S110: Vapar_1982
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Entry
Vapar_1982 CDS
T00916
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00500
Starch and sucrose metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
Module
vap_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Vapar_1982
Enzymes [BR:
vap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Vapar_1982
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
ISOA1-3_C
NRN1
Glyco_hydro_70
Motif
Other DBs
NCBI-ProteinID:
ACS18628
UniProt:
C5CVH9
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All DBs
Position
1:2123527..2125692
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AA seq
721 aa
AA seq
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MTRSSQRNPISAVWPGRPYPRGANWDGEGVNFALFSQHAQGVDLCLFDDKGRHEIQRIPI
RERTDGVWHCYLPEARPGQAYGYRVHGPYKPEEGHRFNPHKLLVDPYAKDLVGELRWGDA
LYGYTVGSKREDLSFDRRDSAPLVPKGRVLEPAFTWGDDRRPSVPWQDMVIYELHVRGFT
MRHPDVPPELRGTYGGLCCAPVVDYLKRLGVTTIELLPVHSFLNDRHLAEKGLQNYWGYN
SLAYFAPETRYSASGKVKEFKTMVKTLHSAGIEVILDVVYNHTCEGNQLGPTLSMRGVDN
ASYYIVNADNRRYYDDFTGCGNTVNLEHPHALQLVMDSLRYWAEEMHVDGFRFDLASALA
REAGKVENLGGFFDAIRQDPTLNRVKLIAEPWDLGHGGYQVGNFPLGWAEWNDRYRDGMR
GFWKGDPGVIGEVGKRLTGSEDLYGWSGKRPNASINFITAHDGFTLDDLVSYNDKHNEAN
GEDNRDGSNHNISWNCGAEGPTEDPEIAALRERQKRNLLATLLLSQGVPMLLAGDERGHT
QNGNNNAYCQDNDISWLDWTPTPERQALITFVERTIALRRAHPSFRRRSFFAGKPSEAES
VTDVVWLRPDGAEMRPEDWSDANARCLAMYMSGGGIADRGPRGEALHDDDFLVLFNAHHD
EIPFTLPPAPYGAWRLLLDTASGTPPPATEDVAALAPAWSEPAYPLQCRSLVVLSRPDVR
P
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcagcagccaacgcaatccgatctcggccgtctggccggggcgcccctatccg
cggggcgccaactgggacggggagggcgtgaacttcgcgcttttttcccagcacgcacaa
ggggtggacctgtgcctcttcgacgacaagggccgccacgaaatccagcgcatcccgatc
cgggagcgcaccgacggcgtatggcactgctacctgcccgaagcccgcccgggccaggcc
tacggctaccgcgtgcacggcccctacaagcccgaggagggccaccgcttcaacccgcac
aagctgctggtcgatccctacgcaaaagacctggtgggcgaactgcgctggggcgatgcg
ctctacggctacacggtcggcagcaagcgcgaagacctctcgttcgaccgccgcgacagc
gcgccgctggtgcccaagggccgcgtgctggagccggccttcacctggggcgacgaccgc
cggccctcggtgccctggcaggacatggtgatctacgagctgcacgtgcgcggcttcacc
atgcgccaccccgacgtgccgcccgagctgcgcggcacctacggcggcctgtgctgcgcg
cccgtggtcgactacctcaagcgcctgggcgtgaccaccatcgagctgctgccggtgcac
agcttcctcaacgaccggcacctggcggagaagggcctgcagaactactggggctacaac
tcgctggcctacttcgcccccgagacgcgctacagcgcctcgggcaaggtgaaggagttc
aagaccatggtgaagacgctgcactcggccggcatcgaggtgatcctggacgtggtctac
aaccacacctgcgaaggcaaccagctcgggcccaccctctcgatgcgcggcgtggacaac
gcctcctactacatcgtcaacgccgacaaccggcgctactacgacgacttcaccggctgc
ggcaacaccgtcaacctggagcatccgcatgcgctgcagctggtgatggattcgctgcgc
tactgggccgaggaaatgcacgtggacggcttccgcttcgacctggcctcggcgctcgcg
cgcgaggccggcaaggtcgagaacctgggcggcttcttcgacgccatccgccaggacccg
acgctcaaccgcgtcaagctcatcgccgagccctgggacctgggccacggcggctaccag
gtgggcaacttcccgctcggctgggccgaatggaacgaccgctaccgcgacggcatgcgc
ggtttctggaagggcgacccgggcgtgatcggcgaggtcggcaagcggctcaccggctcg
gaagacctgtacggctggtcgggcaagcggcccaacgcgagcatcaacttcatcaccgcg
cacgacggcttcacgctcgacgacctggtctcctacaacgacaagcacaacgaggccaac
ggcgaggacaaccgcgacggcagcaaccacaacatctcctggaactgcggcgccgaaggg
ccgacggaggaccccgagatcgccgcgctgcgcgagcgccagaagcgcaacctgctggcc
acgctgctgctgtcgcaaggcgtgccgatgctgctggccggcgacgagcgcggccacacg
cagaacggcaacaacaacgcctactgccaggacaacgacatcagctggctcgactggacg
cccacgcccgagcggcaggcgctgatcaccttcgtggagcgcaccatcgcgctcaggcgc
gcccacccctcgttccggcgccgcagcttctttgccggcaagccctcggaggccgagagc
gtgaccgacgtggtctggctgcggcccgacggcgccgagatgcgccccgaggactggagc
gacgccaacgcgcgctgcctggcgatgtacatgtccggcggcggcattgccgaccgcggg
ccgcgcggcgaggcgctgcacgacgatgattttctggtgctgttcaacgcgcaccacgac
gagatcccgttcaccctgccgcccgctccctatggcgcgtggcggctgctgctcgacacc
gccagcggcaccccgccgcccgccaccgaggacgtggccgcgctcgcgcccgcctggtcc
gagcccgcctatccgctgcagtgccgctcgctagtggtgctgagccggccggacgtgcgg
ccatga
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