Variovorax paradoxus S110: Vapar_2066
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Entry
Vapar_2066 CDS
T00916
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_2066
Transporters [BR:
vap02000
]
Other transporters
Pores ion channels [TC:
1
]
Vapar_2066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ACS18707
UniProt:
C5CWF2
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All DBs
Position
1:2207687..2209816
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AA seq
709 aa
AA seq
DB search
MKPSDEINFMNYTNSMRRRLLVNSFKLGPLLWAPTWAFAADTPDQAVFAAPVAAQTDKNT
DSSALTLGTVNIQATASGPLSARQVFSSVDILGASVLEDQHVDYSWELFSRAPGVQVTQF
KQGTDAGRFSFRGFNGEGRVNAVKLLIDGIPSNDNAGGMPFLDAVFPQDIEAIEIVRGTN
DPRYGLNNIAGNANVITRTGGNQGRASLTLGSFGTKEVEISKGIESGNWSQNYSLAYRDS
DGYRDHADARKLAFSGKWFYTSDDGRWRAGVIARYYRNKALESGYLSYDQAMRTPRSSPA
YASADRGERETAQLSAHLDGELTNTLSWSTKVYANQYENRRWVRFSAASAQQERYNDEKQ
QGAITSLTWRPQVGWAHEFTLEGGLDAQWQHNLGQRYRTTERVRTSQFRDWDFDLDTQGA
YVQAVIRPVEALKIVPAFRVDHVGGQFTDRLGRTTSPVHDYGLIQQPKISVAYALNPQAS
LYANWGRTFQIGTGIDAYRTQARNLQPSINDGWEAGVKFNPLPWLDGRVAYWEQRASGEV
ARVLGVDGLPDPGGLGNVGKTLRKGFDIQLNAKPNARTTAWIAYSHQGARITAPDPSAPA
TRGKEIENVPHYLVSAGVDYQASDKLKLSGWANAQGDYYVERTNTLGRFGRYALLNLGAT
YRVSPTMDVNLQMKNVTNRKYVYAWYDSGSSGYSPGDGRGVYASLNMRF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaagcgacgagatcaacttcatgaactacacgaattcaatgcgccgcaggctc
ctggtcaactccttcaagctcggcccgctgctctgggcaccgacatgggccttcgcagcc
gatacgcccgatcaggccgtcttcgcagcccccgttgccgcacagaccgataagaacacg
gacagttccgcactcacgctgggcaccgtcaacatccaggccacggccagcggaccgctg
tccgcgcggcaggtgttcagttcggtcgacatcttgggcgccagcgtgctggaagaccag
cacgtcgactacagctgggaattgttctctcgcgcaccgggtgtgcaggtcacgcagttc
aagcaaggcaccgacgcggggcgtttctcgttccgcggcttcaacggcgaaggccgcgtc
aatgccgtcaagctgctgatcgacggcatcccgagcaacgacaacgcgggcggcatgccg
tttctcgatgcggtgttcccacaggacatcgaggccatcgagatcgtgcgcggcaccaac
gacccacgctatgggctgaacaacatcgcgggcaacgcgaacgtcatcacgcgcacgggt
ggcaaccaggggcgcgcaagcctcaccctcggcagcttcggcaccaaggaggtcgagatt
tccaagggcatcgagagcggcaactggagccagaactattcgctggcctaccgcgattcg
gacggctaccgcgaccatgccgacgcgaggaagctggccttctcgggcaagtggttctac
accagcgacgacggtcgctggcgcgccggcgtcatcgcgcgctactaccgcaacaaggcg
ctggagtctggttacctgagctacgaccaggccatgaggacgccgcgcagctcgcccgcg
tatgcatcggccgaccgcggcgagcgcgagacggcgcagctcagtgcgcacctggacggt
gaactgacgaacaccctctcatggtcgaccaaggtctatgccaaccagtacgagaaccgg
cgctgggtgcgcttctccgcagcgagcgcccagcaggagcgctacaacgacgagaagcag
cagggcgcgatcacctctttgacctggcggccccaggtcggctgggcgcacgagttcacg
ctggaaggcggcctcgacgcgcagtggcagcacaacctcggccagcgctaccgcaccacc
gagcgcgtgcgcacctcgcaatttcgcgactgggatttcgatctcgacacgcagggggcc
tatgtgcaggcggtgatccgtccggtcgaggccttgaagatcgtgccggccttccgggtc
gaccacgtgggcggccagttcaccgaccggctcggccgcaccacctcgccggtgcatgac
tacgggctcatccagcagcccaagatcagcgtggcctatgcgctgaatccgcaggcgagc
ctctacgccaactggggccgcaccttccagatcggcaccggcatcgatgcctaccgaacg
caggcgcgcaacctccaaccgtcgatcaacgacggctgggaggccggcgtcaagttcaat
ccgctgccatggctcgacgggcgtgtcgcctattgggagcagcgcgcatccggggaagtc
gcgcgcgtcctgggcgtcgacgggctgccggacccgggtggcctgggcaacgtcggcaag
acgctcaggaagggcttcgacatccagctcaatgccaagccgaacgcacgcaccacggcc
tggatcgcctattcgcaccagggggcccgcatcacggcaccggacccgagcgcacccgcc
acgcgcggcaaggagatcgagaacgtgccgcactacctggtgtccgccggcgtggactac
caggcgagcgacaagctcaagctctccggctgggccaacgcgcagggcgactactacgtg
gagcgcaccaacaccttgggccgcttcggacgctatgcgctgctgaacctcggggccacc
taccgcgtgtctcccacgatggacgtgaacctgcagatgaagaacgtgaccaaccgcaag
tacgtctatgcctggtacgacagcggctcctcgggctactcgcccggcgacggccggggt
gtgtacgccagcctgaacatgaggttctga
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