Variovorax paradoxus S110: Vapar_2173
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Entry
Vapar_2173 CDS
T00916
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00010
Glycolysis / Gluconeogenesis
vap00020
Citrate cycle (TCA cycle)
vap00260
Glycine, serine and threonine metabolism
vap00280
Valine, leucine and isoleucine degradation
vap00310
Lysine degradation
vap00380
Tryptophan metabolism
vap00620
Pyruvate metabolism
vap00630
Glyoxylate and dicarboxylate metabolism
vap00640
Propanoate metabolism
vap00670
One carbon pool by folate
vap00785
Lipoic acid metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap01210
2-Oxocarboxylic acid metabolism
vap01240
Biosynthesis of cofactors
Module
vap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vap_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
vap_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
vap_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Vapar_2173
00020 Citrate cycle (TCA cycle)
Vapar_2173
00620 Pyruvate metabolism
Vapar_2173
00630 Glyoxylate and dicarboxylate metabolism
Vapar_2173
00640 Propanoate metabolism
Vapar_2173
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Vapar_2173
00280 Valine, leucine and isoleucine degradation
Vapar_2173
00310 Lysine degradation
Vapar_2173
00380 Tryptophan metabolism
Vapar_2173
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Vapar_2173
00670 One carbon pool by folate
Vapar_2173
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vap04147
]
Vapar_2173
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
Vapar_2173
Exosome [BR:
vap04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
Vapar_2173
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
AlaDh_PNT_C
FAD_oxidored
FAD_binding_2
GIDA
HI0933_like
NAD_binding_8
Pyr_redox_3
3HCDH_N
FAD_binding_3
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
ACS18808
UniProt:
C5CXF2
LinkDB
All DBs
Position
1:2323328..2324758
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AA seq
476 aa
AA seq
DB search
MANKQFDVIVIGGGPGGYIAAIRAAQLGFNVACIDEWKNGKGGPAPGGTCTNVGCIPSKA
LLQSSEHFDQAGHHFADHGIKVEGLGLDLDKMLARKDQVVKQNNDGILYLFKKNKITFFH
GRGSFVKAGEAGYEIKVAGAAEESIEGKHIIVATGSNARALPGAPFDEENILSNDGALRI
GAVPKKLGLIGSGVIGLEMGSVWRRLGAEVTVLEALPTFLGAVDEQIAKEAKKAFDKQKL
KIELGVKVGEIKSSKKGVSVAWTNAKGEAQTLEVDKLIVSIGRVPNTIGLNAEAVGLKLD
ERGAIAVDDDCKTSLPNVWAIGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFNTVPWV
IYTNPEIAWVGQTEQQLKAAGRAYKAGTFPFLANGRARALGDTTGMVKFLADAATDEILG
VHIVGPQASELISEAVVAMEFKASAEDIARICHAHPSLSEATKEAALAVDKRTLNF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaacaattcgacgtcatcgtcatcggcggcggccccggcggctacatcgcc
gcgatccgcgcggcgcagctgggcttcaacgtggcctgcatcgacgagtggaagaacggc
aagggcggccccgcaccgggcggcacctgcaccaacgtcggctgcattccatcgaaggcg
ctgctgcaatcgtcggagcacttcgaccaggccggccaccactttgccgaccacggcatc
aaggtcgaaggcctggggctggacctcgacaagatgctggcccgcaaggaccaggtcgtg
aagcagaacaacgacggcatcctgtatctgttcaagaagaacaagatcaccttcttccat
ggccgcggctcgttcgtgaaggcgggcgaagccggctacgagatcaaggtggcgggcgct
gccgaagagtcgatcgagggcaagcacatcatcgtggccacgggctccaacgcccgcgcg
cttccgggcgcgccgttcgacgaggagaacatcctctcgaacgacggcgcgctgcgcatc
ggcgcggtgcccaagaagctgggcctgatcggctcgggcgtcatcgggcttgaaatgggt
tctgtgtggcgccgcctcggcgccgaagtcacggtgctcgaagcgctgccgaccttcctc
ggcgcggtcgacgagcagatcgccaaggaagccaagaaggccttcgacaagcagaagctc
aagatcgaactcggcgtgaaggtcggcgagatcaagtcgtccaagaagggcgtgagcgtg
gcctggaccaacgccaagggcgaagcccagacgctggaggtcgacaagctgatcgtctcg
atcggccgcgtgcccaacaccatcggcctgaacgccgaagccgtgggcctgaagctcgac
gagcgcggcgccatcgccgtggacgacgactgcaagaccagcctgcccaacgtctgggcc
atcggcgacgtggtgcgcggcccgatgctcgcgcacaaggccgaggaagagggcgttgcc
gtggcggagcgcattgcgggccagcacggccacgtcaacttcaacaccgtgccgtgggtg
atctacaccaaccccgagatcgcatgggtcggccagaccgagcagcagctcaaggccgcg
ggccgcgcctacaaggccggcaccttcccgttcctcgcgaacggccgcgcacgcgcgctg
ggcgacacgaccggcatggtcaagttcctggccgacgcggccacggacgagatcctgggc
gtgcacatcgtgggcccgcaggccagcgagttgatctccgaagccgtggtggcgatggag
ttcaaggccagcgccgaagacatcgcgcgcatctgccatgcgcacccgtcgctgtcggaa
gccacgaaggaagcggcacttgccgtggacaagcgcacgctgaacttctga
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