KEGG   Variovorax paradoxus S110: Vapar_2178
Entry
Vapar_2178        CDS       T00916                                 
Name
(GenBank) helicase c2
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
vap  Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:vap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vap03400]
    Vapar_2178
Enzymes [BR:vap01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Vapar_2178
DNA repair and recombination proteins [BR:vap03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Vapar_2178
SSDB
Motif
Pfam: Helicase_C_2 DEAD DEAD_2
Other DBs
NCBI-ProteinID: ACS18813
UniProt: C5CXF7
LinkDB
Position
1:2327642..2329699
AA seq 685 aa
MSETLEDKVRDAFAQGGVLSRAAEQFRERSGQTEMALAVARTIEDGGVLVVEAGTGVGKT
FSYLVPALLSGERVLLSTATKTLQDQLFGRDLPRLVEALELPVRTALLKGRASYLCLHRL
DLARHDASLPERGSLRTLAKIEQWSKATRTGDLAELPGLDERSPLIPLITSTRENCLGAQ
CPQFKPCHVNLARREALAADVVVINHHLFFADLAVRETGMAELLPTVSVVVFDEAHQLNE
TGVQFLGAQLGSGQALDFARDLLGAGLQHARGLVDWQQLVAAVERAARELRLAVGKQWPG
TKLRWVGPSPEGIDAQAWQDALEALQHAFEMAAEGLDTVSEISPDFVRLYERAQQLAKRA
ARFALPCETDSVRWVDVGTQLRLVESPLDIAEAMRTRVLKIGSGAAPDDGDEHEARAAPE
DSGRAWVFTSATLGDEPTLRWFTEPCGLGDAEVLRVQSPFDYAAQAGLYVPRAFPKPNDA
AHSARVAQLAARGAAELGGRTLVLTTTLRALRAIGDEMKQQFERLEADVRPEVLVQGELP
KRVLMDRFREGAEGGRVGCVLVASASFWEGFDAPGDALQLVVIDKLPFPPPNDPLVEARS
QRLEAQGRSSFSDYSLPEAAVALKQGAGRLIRRETDCGVLAICDTRLVAMGYGRRLLAAL
PPMRRLESEADFEAAIGELRNSLSA
NT seq 2058 nt   +upstreamnt  +downstreamnt
gtgagcgaaacactcgaggacaaggtgcgcgacgccttcgcgcagggcggcgtcctgtcg
cgtgcggcagagcagttccgcgagcgctcggggcagaccgaaatggcgctggccgtcgcc
cgcaccatcgaggacggcggcgtgctggtggtcgaggccggcaccggcgtgggcaagact
ttctcgtatctcgtgccggcgttgctgagcggcgagcgcgtgctgctgtcgaccgccacc
aagaccctgcaggaccagttgttcggccgcgacctgccgcggctggtcgaggcgctcgag
ctgccggtgcgcacggcgctgctcaaggggcgcgcgagctacctgtgcctgcaccggctc
gacctcgcgcgccacgatgcgtcgcttcccgaacgcggcagcctgcgcacgctcgccaag
atcgagcagtggtccaaggccacgcgaaccggcgacctggccgagctgcccgggctggac
gagcgctcgccgctcatcccgctcatcacttccacgcgcgagaactgcctgggcgcgcag
tgcccgcagttcaagccctgccacgtcaacctggcgcggcgcgaggcgctggcggccgat
gtggtggtcatcaaccatcacctgtttttcgccgacctcgcggtgcgcgagaccggcatg
gcggaactgctgccgaccgtgagcgtggtggtgttcgacgaggcccaccagctcaacgaa
accggcgtgcagttcctgggtgcgcagctcggcagcgggcaggccctggactttgcgcgc
gacctgctcggagccggcttgcagcatgcgcgcgggctggtcgactggcagcagctggtg
gcggccgtcgaacgcgccgcgcgcgagctgcgccttgcggtcggcaagcagtggcccggc
accaagctgcgctgggtgggcccgtcgccggaaggcatcgacgcgcaggcctggcaggac
gcgctcgaagccctgcagcacgcctttgaaatggctgccgaagggctcgataccgtcagc
gagatatcgcccgatttcgtgcgcctgtatgagcgggcgcagcagctcgccaagcgcgcg
gcacgcttcgcgctgccctgcgaaaccgactcggtgcgctgggtcgacgtgggcacgcag
ctgcggctggtcgaatcgccgctcgacattgccgaggccatgcgcacgcgcgtgctcaag
atcggcagcggcgcggcccccgacgacggcgatgaacacgaagcccgcgcggcgcccgaa
gacagcggacgcgcctgggtcttcacctccgccacgctgggcgacgagcccacgctgcgc
tggttcaccgagccgtgcggcctgggcgacgccgaggtgctgcgggtgcagagccccttc
gactatgccgcgcaggccgggctctatgtgccgcgtgcctttcccaagcccaacgacgcc
gcccacagcgcgcgcgtggcgcagctggccgcacgcggcgccgccgagctcggcggccgg
accctggtgctgaccaccacgctgcgcgcgctgcgcgccatcggtgacgagatgaagcag
cagttcgaacggctcgaggccgacgtgcggcccgaggtgctggtgcagggcgagctgccc
aagcgcgtgctcatggaccgcttccgcgaaggcgcggagggcgggcgcgtcggctgcgtg
ctggtggcgtcggcatcgttctgggaaggctttgatgcgcccggcgatgcattgcagctg
gtggtgatcgacaagctgccgttccctccgcccaatgatccgctggtcgaggcgcgctcg
cagcgcctcgaagcccagggccgtagctcgttcagcgactattcgctgcccgaggcggcc
gtggcgctcaagcagggagcggggcggctgatccgccgcgaaaccgactgcggcgtgctt
gccatttgcgacacccgcctggtcgccatgggctatggccggcggctcctggccgcgctg
ccgccgatgcgcaggctggaaagcgaagcggacttcgaggcggcgatcggcgaactcagg
aactcgctctcggcctga

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