Variovorax paradoxus S110: Vapar_2184
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Entry
Vapar_2184 CDS
T00916
Name
(GenBank) radical SAM enzyme, Cfr family
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vap03009
]
Vapar_2184
Enzymes [BR:
vap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
Vapar_2184
Ribosome biogenesis [BR:
vap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Vapar_2184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
ACS18819
UniProt:
C5CXG3
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All DBs
Position
1:2334980..2336128
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AA seq
382 aa
AA seq
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MTTANLLEFDLEGLAAFCEKLGEKRFRATQLFRWIHQRGASDFAQMTDLAKSLREKLATT
ARVEALPVITQHESKDGTIKWLFDVGDGNAVEAVFIPEDDRGTLCVSSQAGCAVGCRFCS
TGHQGFSRNLSTGEIVAQLWFAEHFLRKHLKRDERVISNVVMMGMGEPLQNYTALVPALR
TMLDDNAYGLSRRRVTVSTSGVVPMIDRLGADCPVAMAVSLHAPNDALRDDLVPLNRKYP
IAELLEACKRYLVHAPRDFITFEYCMLDGVNDQPEHARQLVELVRTHGVSCKFNLIPFNP
FPASGLLRSPQPRVLAFAKALSEAGLVTTVRKTRGDDIDAACGQLAGDVKDRTRAAERMA
QRRVGERTVVLHPVRKTAPQEH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggccaacctgctcgaattcgatctcgaggggctggctgcgttctgcgaaaag
ctcggcgagaagcgattccgcgccacgcagctgttccgctggatccaccagcgtggcgcc
agcgacttcgcccagatgaccgatctggccaagtcgctgcgcgagaagctcgccaccacc
gctcgcgtcgaggccctgccggtcatcacgcagcacgaatccaaggacggcacgatcaag
tggctgttcgacgtcggcgacggcaatgccgtcgaagccgtattcattcccgaagacgac
cgcggcacgctgtgcgtgtcgtcccaggccggctgcgccgtgggttgccgcttctgctcc
acggggcaccagggcttcagccgcaacctgagcacgggcgagatcgtcgcccagctctgg
tttgccgaacacttcctgcgcaagcacctgaaacgcgacgagcgcgtcatctccaacgtg
gtgatgatgggcatgggcgagccgctgcagaactacaccgcgctggtgccggcgctgcgc
accatgctcgacgacaacgcctacggcctgtcgcgccgccgcgtgaccgtgtcgacctcc
ggcgtggtgccgatgatcgaccgcctgggcgccgactgcccggtggccatggccgtgtcg
ctgcatgcgcccaacgatgcgctgcgcgacgacctcgtgccgctcaaccgcaagtacccg
attgccgagctgctcgaggcctgcaagcgctacctggtgcatgcgccgcgcgacttcatc
accttcgagtactgcatgctcgatggcgtcaacgaccagcccgagcatgcgcggcagctg
gttgaactcgttcgcacccatggcgtgtcgtgcaagttcaacctgattccgttcaatccg
tttccggcctcgggcctcttgcgttcgccgcagccgcgggtgctggcctttgccaaggca
ctgagcgaggccggcctcgtgaccaccgtgcgcaagacgcgcggcgacgacatcgatgcg
gcctgcggacagctggccggcgacgtcaaggaccgtacccgcgcggccgaacgcatggcc
cagcgccgtgtgggcgagcgcaccgttgttctgcatccggttcgcaagaccgccccccag
gagcattga
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