Variovorax paradoxus S110: Vapar_2324
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Entry
Vapar_2324 CDS
T00916
Name
(GenBank) exonuclease-like protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vap03400
]
Vapar_2324
Enzymes [BR:
vap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Vapar_2324
DNA repair and recombination proteins [BR:
vap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Vapar_2324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
ACS18951
UniProt:
C5CYJ2
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All DBs
Position
1:2484127..2486721
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AA seq
864 aa
AA seq
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MNEGHPVQALWCDPAGGVVARIAGAVAQHGLHAARTVVLVPYAQLMGVAHGMWSRCGSPG
FAPRFETTRNWARSAGGFLPTGYDIAFDMARDLVTAQALLSQAGFAAERFALAGRVVELA
YQLAPLAAAALPEVRGSEWAQRAAQVADAGSESEWFRIESALIRVAVAWAANSGYATDVL
LRDTVRAQVDALIVLEGFQADPLTQTLCSLWGDRAIHLSLVPASPAATTAAAHVAADPED
EAELAAACVLRHLAEGRAPVALIATDRALTRRIGAQLQAQGVTAHDETGWKLSTTRAAAT
VMSALRACAHDAGSDQVLEWLKSGADGDALATQALEARLRREGVREWSAWCGQAARSEKP
QDIALLPFTEAVEGRRMAMARSRPLADWLRALRELLEAGEQWEPLAADMAGAKVIGALWL
DADAHGDDDEFPGGRHTLAEFTAWVRDVLEDASFVPPAGNEAPQVVVLPLHQLLGRAFGA
VVIPGCDDRRLPASPEPPGNWSAAQRAELGLPARETLEAAQRSAWAAALCNPCCEVLWRQ
SDASGEPVRPSPLVQALQLDHALQMAADPRTPREVALQPTAYPTPSGELLPLRNISTSVY
EDLRRCPYRFFALRQLGLRSADELDAEVDKRDFGNWLHAALGHFHEALKEKPTSDAAERV
AYISAAAERATREFGLSDAEFLPFAAAWPAVRDGYLQWLAGHEASGAVFAESEPWMEQPL
GSLQLVGRLDRIDRMPDGQAFVIDYKTESAAVTKERVKDPTEDTQLAFYAALVADDTLRA
AYVNVGEKSSGTQTVEQPVVVEARDALVAGILDDFTRIAEGAALPPLGEGAVCDYCAARG
LCRKDFWEIEQPAPSSPAEGGPAK
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaggccaccccgtccaggccctgtggtgcgaccccgccggcggcgtcgtcgcg
cgcattgccggcgccgttgcgcagcacgggctgcatgcggcgcgcaccgtggtgctggtg
ccgtacgcgcaactgatgggtgtggcccacggcatgtggtcgcgctgcggcagccccggc
ttcgcgccgcgcttcgagaccacgcgcaactgggcacgcagcgcggggggcttcctgccc
acgggctacgacatcgccttcgacatggcgcgcgacctggtcacggcccaggcgctgctg
tcgcaggccggctttgccgccgaacgcttcgcgctggccgggcgcgtggtcgagctggcc
taccagctggcgcccctggcggccgccgcgctgcccgaggtacgcggcagcgaatgggcg
cagcgcgcggcgcaggtggccgatgcgggcagcgagtcggaatggttccgcatcgaaagc
gcgctgatccgcgtcgcggtggcctgggccgccaattcgggctatgccaccgatgtgctg
ctgcgcgacaccgtgcgtgcgcaggtcgatgcgctgatcgtgctcgaaggcttccaggcc
gatccgctcacgcagacgctctgcagcctgtggggcgaccgcgccatccatctctcgctg
gtgcccgcgagccctgcggccaccacggcagccgcgcatgtcgccgccgaccctgaagac
gaggcggaactggccgccgcctgcgtgctgcggcacctggccgagggccgcgcgccggtg
gcactgatcgcgaccgaccgggcgctcacgcggcgcatcggcgcacagctccaggcgcag
ggtgtcacggcgcacgatgaaaccggctggaagctttccaccacgcgcgccgccgccacc
gtgatgagcgcactgcgcgcctgcgcgcacgacgccggcagcgaccaggtgctcgaatgg
ctcaagagcggcgccgacggcgatgcgctcgccacccaggccctcgaagcccggctgcgg
cgcgaaggcgtgcgcgagtggtccgcctggtgcggccaggccgcgcgcagcgagaagccg
caggacatcgcgctgctgcctttcaccgaagccgtcgaaggccgccgcatggccatggcc
cgctcccggcccctggccgactggctgcgcgcgctgcgcgaactgctcgaggccggggag
caatgggagccgctcgcagccgacatggccggcgccaaggtgatcggcgccttgtggctc
gatgccgatgcccacggcgacgacgacgaatttcccggcggacgccacacgctggccgag
ttcacggcctgggtgcgcgacgtgctggaggacgccagcttcgtgccgcccgccggcaac
gaggcgccgcaggtggtggtgctgccgctgcaccagttgctcggccgcgcgttcggcgcc
gtggtcattcccggctgtgacgaccggcgcctgcccgcatcgcccgagccgcccggcaac
tggagcgccgcgcagcgcgccgaactgggcctgcccgcgcgcgaaacgctcgaggccgcg
caacgctcggcctgggccgcggccttgtgcaacccgtgctgcgaagtgctgtggcgccag
tcggatgcgagcggcgagccggtgcgtccgagcccgctggtgcaggcgctgcaactcgac
cacgccttgcagatggcggcggacccgcgcacgccgcgcgaggtggcgctgcagccgacc
gcttaccccacgccctcaggcgagctgctgccgttgcgcaacatctcgaccagcgtctat
gaagacctgcgccgctgcccctaccgcttcttcgcgctgcggcagctgggcctgcgcagt
gccgacgaactcgatgccgaagtcgacaagcgcgacttcggcaactggctgcatgccgcg
ctgggccatttccacgaggcgctgaaagagaagccgaccagcgatgccgccgagcgtgtg
gcgtacatcagtgcagcggccgagcgcgccacacgcgagttcggactgtccgatgccgag
ttcctgcccttcgccgcggcatggccggcggtgcgcgacggctaccttcaatggcttgcc
ggacacgaggcgagcggcgccgtgttcgccgaatccgagccctggatggaacagccgctg
ggcagcctgcagttggtcggccggctggaccgcatcgaccgcatgccggacggccaggct
ttcgtgatcgactacaagaccgagtcggccgcagtgaccaaggagcgcgtgaaggacccg
accgaggacacgcagctcgccttctatgccgcgctggtggccgacgacacgctgcgcgcg
gcctacgtcaacgtcggcgaaaaatcgtccggcacgcagaccgtcgagcagcccgtggtg
gtggaggcgcgcgatgcgctggtggccggcatcctcgacgacttcacccgcatcgccgag
ggcgcggcgctgccgccgctgggggagggcgctgtttgcgattactgcgcggcgcgcggg
ctttgcagaaaagacttctgggagatcgagcagcctgcgccttcgtcaccggccgaggga
gggcccgcgaaatga
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