Variovorax paradoxus S110: Vapar_2325
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Entry
Vapar_2325 CDS
T00916
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vap03400
]
Vapar_2325
Enzymes [BR:
vap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Vapar_2325
DNA repair and recombination proteins [BR:
vap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Vapar_2325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
ACS18952
UniProt:
C5CYJ3
LinkDB
All DBs
Position
1:2486718..2489981
Genome browser
AA seq
1087 aa
AA seq
DB search
MNGAAYEHNGRHVTREAFYTVACDPRRSVAVEACAGAGKTWMLVSRILRALLEEGESACE
PHEILAITFTKKAAGEMRERLDQWLEQFAERSPEELVRELVIRGVEPDAALAAVPRLQGL
YRRLLEGGRPVQFRTFHAWFAGLLRNAPLAVLRELGLPANYELLEDDAEARSRTWRPFFE
AVTADKEALADYYAVVATYGRSQTAKALGEALTRRVEFSLSDPASAVQHFSAMHPSLEGL
DEPTEALRGEQARRRWLDRAAALGREANKTPQKAADAVIDVFGTGEPPRESLAAALAHLR
KNFFVATEDRLNKNLQKYPAAQEAEAELQTLCAAQAQHAAWLYQQRMTRLTRLLIAAFAE
VKRAHGWVDMNDVEQAAQLLLGQSALSGWVQERLDARIAHLLIDEFQDTNPLQWQALYGW
LSAYTGAGGKAPRVFIVGDPKQSIYRFRRAEPQVFIAAKKFVREGLGGELLNCDHTHRNA
RAVVGLVNQAMLAAQDAGEFDGYRAHTTERNDQGDLLKLPPIDRGALDTTAEAAPADDGM
LHWRDSLVTPRVLPEEQLLQKECEQAARWVAQRIADGTPPRQIMVLARRRNRLSAMQDAL
RQRHIPVQQPEKNELHDAPEVQDVVALIDALVSPAHDLSLARGLKSPLFGIGDDALVQLA
LRQREQPSSSWFALIQKGEGLPAELVAAGARLKQWQRWLAALPPHDALSAIFHDGDVLAR
FGAAMPSAMRQSALANLRGLLAASLEIEGARFATPYALVRALRAGGVRAPSVAVPDAVQL
LTVHGAKGLEADTVLMLDCDAPPPRAQTMGVLVEWKGSDSAPTRFVFLASEKTPPGCAAT
LLEEEQRARHREELNGLYVATTRARERLVLSSVQPARANEGSWWSRLESMCEPVEADEPL
LALPVETGGGSFSMKKMPVLAPAAKESPATRKAASATVDARAAAFGQAMHRLLEWALPGE
ALPPAHVRAAAREFMLDAQQARGAAVLAERIRAGAGAWAWDERMIDWHGNEVTLVHEGET
LRIDRLVRERASGAWWILDYKSAARPERDAELIAQMQRYRAAVQHAYPGALVRAAFLTGQ
GELVTLE
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgccgcctacgaacacaatggccggcacgtcacgcgcgaggccttctacacc
gtcgcctgcgatccgcggcgctcggtggccgtcgaagcctgcgcgggcgcgggcaagacc
tggatgctggtgtcgcgcatcctgcgcgcgctgctcgaagagggtgaatccgcctgcgag
ccgcacgagatcctggccatcaccttcaccaagaaggccgccggcgaaatgcgcgagcgg
ctcgaccaatggctcgagcagttcgctgagcgcagccccgaggaactggtgcgcgaactc
gtgatccgcggcgtcgagcccgatgccgcgctggccgccgtgccgcgcctgcaaggcctc
tacaggcgcctgctcgaaggcggccggccggtgcagttccgcaccttccacgcctggttc
gcgggcctgctgcgcaatgcgccgctggcggtgctgcgcgaactcggcctgcccgcgaac
tacgaactgctcgaggacgatgcggaggcgcgctcgcgcacctggcgccccttcttcgaa
gcggtgacggccgacaaggaggcgctggccgactactacgccgtcgtcgccacctacggc
cggtcgcagaccgccaaggccctgggcgaagcgctcacgcgccgggtcgagttctcgctg
tccgatccggcgtcggcggtgcagcatttcagcgccatgcatccgtcgctcgaaggcctg
gacgaaccgaccgaggcactgcgcggcgagcaggccaggcgccgctggctcgaccgcgcc
gccgcgctcggccgcgaagccaacaagacgccgcagaaagcggccgatgcggtcatcgac
gtgttcggcaccggcgagccgccgcgggagtcgctcgcggccgcgctcgcgcacctgcgc
aagaatttcttcgttgccaccgaagaccggctcaacaagaacctgcagaaataccccgcc
gcgcaggaagccgaggccgagctccagaccctgtgcgccgcgcaggcccagcacgcggcc
tggctctaccagcagcgcatgacgcgcctcacgcgccttctgatcgcagccttcgccgag
gtcaagcgcgcccatggctgggtcgacatgaacgacgtcgaacaggccgcacaactgctg
ctgggccagtcggcgctgtcgggctgggtgcaggagcggctcgatgcgcgcatcgcgcac
ctgctgatcgatgagttccaggacaccaatccgctgcagtggcaggcgctctacggttgg
ctcagtgcctacaccggcgcgggcggcaaagcgccgcgcgtcttcatcgtgggcgacccg
aagcagagcatctaccgctttcgccgtgccgagccgcaggtgttcatcgccgcgaagaaa
ttcgtgcgcgaagggctgggcggcgaactgctcaattgcgaccacacccaccgcaacgcg
cgtgcggtggtcggcctcgtcaaccaggcgatgctggccgcacaggacgccggcgagttc
gacggctaccgcgcgcacaccaccgaacgcaacgatcagggcgatcttctcaagctcccg
cccatcgatcgcggggccctcgataccaccgccgaggccgcgcccgcggacgacggcatg
ctgcactggcgcgacagcctggtcacgccgcgggtgctgcccgaagagcaactgctgcag
aaggaatgcgaacaggccgcgcgctgggtcgcgcagcgcattgccgatggcacgccgccg
cgccagatcatggtgctggcgcgccgccgcaaccggctgtccgccatgcaggacgcgctg
cgccagcgccacattcccgtgcagcagcccgagaagaacgaactgcacgacgcccccgaa
gtgcaggacgtggtggcgctgatcgatgcgctggtgtcgcccgcgcacgacctttcgctg
gcgcgcgggctcaagtcgccgctcttcggcattggcgacgatgcgctggtgcaactggcg
ctgcgccagcgcgagcaaccctcgtcgagctggttcgcgctgatccagaagggcgagggc
ctgccggcggaactggtcgcggccggcgccaggctcaagcagtggcagcgctggctcgcc
gcactgccgccgcacgatgcgctcagcgcgatcttccatgatggcgatgtgctggccagg
ttcggcgccgccatgccttcggccatgcgccagagcgcgctggccaatctgcgcgggctg
ctggcggcctcgctcgagatcgagggcgcgcgctttgccacgccctatgcgctggtgcgc
gcgctgcgcgccggcggcgtcagggcgccatccgtcgccgtgcctgatgcagtgcaactg
ctcaccgtgcacggcgccaagggcctggaggctgacaccgtgctcatgctcgactgcgac
gcgccgccgccgcgcgcccagaccatgggcgtgctggtcgaatggaaaggcagcgacagc
gcgcccacgcgcttcgtgttcctggcaagcgaaaaaacgccgccgggctgcgcggccacg
ctgctcgaggaagagcagcgcgcgcgccatcgcgaggagctcaacggcctctacgtcgca
accacgcgggcgcgcgagcgcctcgtgctgtcgtcggtgcagccggcacgggccaacgag
ggcagctggtggtcgcggctcgaatcgatgtgcgaacccgtcgaagccgatgagccgctg
ctcgcgttgccggtggagaccgggggcggcagtttctcgatgaagaagatgcccgtgctc
gcgcctgcggccaaggaatcaccggccaccaggaaagccgcaagcgctaccgtcgatgcg
cgggctgccgccttcggccaggcgatgcaccggctgctcgaatgggcgctgccgggcgag
gcgctgccgcccgcgcatgtgcgcgccgcggcccgtgaattcatgctcgacgcgcagcag
gcgcgcggcgccgcggtgctggccgagcgcatccgcgcgggcgccggcgcctgggcgtgg
gatgagcgcatgatcgactggcacggcaacgaagtgacgctggtccacgaaggcgagacg
ctgcgcatcgaccgactggtgcgcgagcgcgccagcggtgcctggtggatcctcgactac
aaatccgctgcgcgccccgaacgggacgcggaattgatcgcacagatgcagcgctaccgc
gcggccgtgcaacatgcctatcccggtgccttggtgcgcgccgcgttcctgaccgggcag
ggcgaactggtaactctcgaatga
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