Variovorax paradoxus S110: Vapar_2413
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Entry
Vapar_2413 CDS
T00916
Name
(GenBank) transcriptional regulator, TetR family
KO
K23777
TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_2413
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Vapar_2413
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GFIT
Motif
Pfam:
CecR_C
TetR_N
Motif
Other DBs
NCBI-ProteinID:
ACS19040
UniProt:
C5CJI7
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All DBs
Position
1:complement(2578410..2579132)
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AA seq
240 aa
AA seq
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MSASALQALSARAPRSDGVEARQRLLYAALALFAANGFAKTSTREIARAAGVNISAISYY
FGDKAGLYAATFGEPMGGNAGDFISLYAAPELPLEEALQIFFTRMIEPLKQGEIVRQCIQ
LHLREMLEPTSQWAEEMERDIKGPHNAIARILCRRLGLARPDDDVHRLSFAITGLAMQLF
VSQDLVEAIRPSLLNTPRSVDTWAQRLTGYAVALVEAEALRRQTAAKPAAAPARSGRKKT
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctccgccctgcaagcactttccgcccgcgcaccgcgcagcgacggcgtcgaa
gcacgccagcgcctgctctacgccgccctcgcgctgttcgccgccaatggcttcgccaag
acctcgacccgcgagatcgcgcgcgccgcgggcgtgaacatctcggccatcagctactac
ttcggcgacaaggccgggctgtatgccgccaccttcggcgagccgatgggcggcaatgcg
ggcgatttcatctcgctctatgccgcgcccgagctgccgctggaagaggcgctgcagatc
ttcttcacgcgcatgatcgagccgctcaagcagggagagatcgtgcgccagtgcatccag
ctgcacctgcgcgaaatgctcgagccgaccagccagtgggccgaggagatggagcgcgac
atcaagggtccgcacaatgccattgcgcgcatcctgtgccggcgcctgggcctcgcgcgg
cccgacgacgacgtgcaccgcctgagctttgccatcacgggcctggcgatgcagcttttc
gtgagccaggacctcgtcgaggcgatacgcccctccctgctgaacacgccgcgcagcgtg
gacacctgggcgcagcgcctcacgggctatgccgttgcactggtcgaggccgaagccctg
cgccgccaaaccgccgccaagcccgcggccgcgcccgcccgttccgggagaaagaagaca
tga
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