Variovorax paradoxus S110: Vapar_2416
Help
Entry
Vapar_2416 CDS
T00916
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_2416
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_2416
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_2416
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Vapar_2416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
ACS19042
UniProt:
C5CJI9
LinkDB
All DBs
Position
1:2581314..2582507
Genome browser
AA seq
397 aa
AA seq
DB search
MNRRHLVALAALAAGAAAAPAWAQSNEIRIAHIYSKTGPLEAYGKQTQTGLMMGLDYATG
GTMMVNGKKLVVIEKDDQGKPDLGKSLLAAAYSDDKAALAVGPTASGVALAMLPVAEEYK
KILVVEPAVADSITGDKWNKYIFRTGRNSSQDAISNAVAADASDISMVMLAQDWAFGRDG
VKAFKDALKKTKIVHEEYLPPATTDFTAGIQRMVDALKDKPGRKVIAVVWAGATTPFNAL
ADAELKKRYNIDVATGGNILPAMTAYKRFPGMEGATYYYFGIPKNPVNEALVAAHYKQFK
APPDFFTAGGFSAAMAVVTALKKTGGDTGTNKLIGAMEGMSFDTPKGKMTFRKEDHQAMQ
SMYHFKIKADPAFAWGVPELVREIKPEEMDIPIKNKR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtcgccacctcgtcgccctggctgcactcgccgccggcgccgccgcagccccc
gcctgggcccagtccaacgaaatccgcatcgcccacatctacagcaagaccggtccgctc
gaggcctacggcaagcagacccagaccggcctgatgatgggcctggactacgccaccggc
ggcacgatgatggtcaacggcaagaagctcgtggtcatcgagaaggacgaccagggcaag
cccgacctgggcaagtcgctgctcgccgccgcgtactccgacgacaaggccgcgctggcc
gtgggccccacggcttcgggcgtggcgctggccatgctgccggtggccgaggaatacaag
aagatcctggtcgtggagcccgcggtggccgactcgatcaccggcgacaagtggaacaag
tacatcttccgcaccggacgcaattcgagccaggacgcgatcagcaacgcggtggccgcc
gacgcgagcgacatctccatggtcatgctggcgcaggactgggcctttggccgcgatggc
gtgaaggcattcaaggacgcgctgaagaagaccaagatcgtccacgaggaatatctgccg
ccagccacaaccgacttcaccgcgggcattcagcgcatggtcgatgcgctgaaggacaag
cccggccgcaaggtgatcgccgtggtgtgggcgggcgccaccacccctttcaacgcgctg
gccgatgccgagctgaagaagcgctacaacatcgacgtggccacgggcggcaatattctg
cccgccatgactgcgtacaagcgtttcccgggcatggaaggcgctacgtactactacttc
ggcatcccgaagaaccccgtcaacgaggcgctggtggccgcgcactacaagcagttcaag
gcaccgccggacttcttcacggccggcggcttctcggccgcaatggcggtggtcacagcg
ctcaagaagacgggcggcgacaccggcaccaacaagctcatcggcgccatggaaggcatg
agcttcgacacgcccaagggcaagatgaccttccgcaaggaagaccaccaggcgatgcag
tcgatgtaccacttcaagatcaaggccgacccggccttcgcctggggcgtgccggagctc
gtgcgcgagatcaagcctgaagagatggacattcccatcaagaacaagaggtag
DBGET
integrated database retrieval system
