Variovorax paradoxus S110: Vapar_2518
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Entry
Vapar_2518 CDS
T00916
Name
(GenBank) hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00020
Citrate cycle (TCA cycle)
vap00620
Pyruvate metabolism
vap00720
Other carbon fixation pathways
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
Module
vap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Vapar_2518
00620 Pyruvate metabolism
Vapar_2518
09102 Energy metabolism
00720 Other carbon fixation pathways
Vapar_2518
Enzymes [BR:
vap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Vapar_2518
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Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
Motif
Other DBs
NCBI-ProteinID:
ACS19144
UniProt:
C5CJU1
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All DBs
Position
1:complement(2657749..2659302)
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AA seq
517 aa
AA seq
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MTTTIQQADLIESISAALQYISYYHPADYIAHLAKAYEREQSPAAKDAIAQILTNSKMSA
TGHRPICQDTGIVNVFLKVGMDVRWGGFTGSLDDAINEGVRRGYNHPDNTLRASVVADPQ
FDRKNTKDNTPAVIFTEIVPGNTVEVTVAAKGGGSENKSKLVMLNPGDSVVDWVLKTVPT
MGAGWCPPGMLGIGIGGTAEKAALMAKESLMDDLDMHELQAKKASGAELSKVEALRIELY
EKVNALGIGAQGLGGLATVLDIKIKMYPTHAASKPVAMIPNCAATRHAHFVMDGSGAVYL
DPPSLDLWPDVNWAPDEKKSKRVDLDKLTPAEVASWKPGDTLLLNGKMLTGRDAAHKRIQ
DMLAKGEKLPVDFTNRVIYYVGPVDPVGGEAVGPAGPTTATRMDGFTEMMLAQTGLIAMI
GKAERGPVAIDAIKKHKSAYLMAVGGAAYLVSKAIKTAKVVGFEDLGMEAIYEFDVVDMP
VTVAVDAGGTSAHITGPAEWQKRIASGEFKTIMMEEA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacgatccagcaggccgacctgatcgaatcgatcagcgccgcgctgcagtac
atcagctactaccatcccgccgactacatcgcccacttggccaaggcctacgagcgcgag
caaagccccgccgccaaggacgccatcgcgcagatcctcaccaacagcaagatgagcgcc
acgggccaccgcccgatctgccaggacaccggcatcgtcaacgtgttcctcaaggtgggc
atggacgtgcgctggggcggcttcaccggcagcctggacgacgccatcaacgaaggcgtg
cgccgcggctacaaccatcccgacaacacgctgcgcgcctcggtcgtggccgatccgcag
ttcgaccgcaagaacaccaaggacaacacgcccgcggtgatcttcaccgagatcgtcccg
ggcaacaccgtcgaggtgacggtcgcagccaagggcggcggcagcgagaacaagagcaag
ctcgtgatgctgaaccccggcgacagcgtggtcgactgggtgctcaagaccgtgccgacc
atgggcgccggctggtgcccgccgggcatgctgggcatcggcatcggcggcacggccgag
aaggccgcgctgatggccaaggaaagcctgatggacgacctcgacatgcacgagctgcag
gccaagaaggcctcgggcgcggaactgagcaaggtcgaggcgctgcgcatcgagctgtac
gagaaggtcaatgcgctgggcatcggcgcgcaaggcctgggcggcctggccaccgtgctg
gacatcaagatcaagatgtatccgacgcacgcggccagcaagcccgtggcaatgatcccc
aactgcgcggccacgcggcatgcgcacttcgtgatggacggcagcggcgcggtctacctc
gacccgccctcgctcgacctctggcccgacgtcaactgggcacccgacgaaaagaagagc
aagcgcgtcgacctcgacaagctcacgcccgccgaagtggccagctggaagcccggagac
acactgctgctcaacggcaagatgctcaccggccgcgatgccgcgcacaagcgcatccag
gacatgctggccaagggcgagaagctgccagtcgatttcaccaaccgcgtcatctactac
gtcggcccggtcgatccggtgggcggcgaggccgtgggcccggccggcccgaccaccgcc
acgcgcatggacggcttcaccgagatgatgctggcccagaccggcctgatcgcgatgatc
ggcaaggccgagcgcggcccggttgccatcgatgccatcaagaagcacaagagcgcctac
ctcatggccgtgggcggcgccgcctacctcgtgagcaaggcgatcaagaccgccaaggtg
gtgggcttcgaggacctgggcatggaagccatctatgaattcgacgtggtcgacatgccg
gtgacggtggcggtcgatgccggcggcaccagcgcgcacatcaccggcccggccgagtgg
cagaagcgcattgcgagcggcgagttcaagaccatcatgatggaagaggcttga
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