Variovorax paradoxus S110: Vapar_2547
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Entry
Vapar_2547 CDS
T00916
Name
(GenBank) TonB-dependent receptor plug
KO
K16092
vitamin B12 transporter
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_2547
Transporters [BR:
vap02000
]
Other transporters
Pores ion channels [TC:
1
]
Vapar_2547
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ACS19173
UniProt:
C5CKL9
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All DBs
Position
1:2688734..2690581
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AA seq
615 aa
AA seq
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MALLQLPAVAHAQQDAPALGETVVTANRTPQPLSDLVGDVSVVDRQTIERSGAVGVADVL
ARLPGIEITRNGSVGNTTSLYIRGAETRFTAVYVDGVRVDSQSTGGAGWESIPLSQIDRI
EVLRGPAAAVYGSDAVGGVIQLFTRRGEEGVAPYAGIGFGSHGLRKAEAGVSGKSGAFDY
SLGAAHEESRGFNVLPMDKRTPSKDGFTSPDRDGYRSNSGNLRLGYQLTPNQRLEATLLY
SDMEAGYDPPVSFRTKPPILFRNDISNNTLRTAGLSWSAKWNDIYSTRVQVTDSQSVYKT
QPSFYRTETNLRGYLFQNEFRFGPHLVTATLERREDALENAPTISSGLLSSKRSQDAVSL
GYGFVQGAHSLQLHVRHDDDSEFGGKATGSAAYGYAITPRLRATVSAGTAFRAPTLYQRF
SEYGVASLKPESSRNVELGLQYTDGGTHAGIVVYQNRVENLIVFDGSATNCRSGFGCYAS
TARARYQGVTLSGGHRIGDVSLRASLDFQDPRDLDTDHLLARRARRHGTLGADWRIAGWT
LGAELQSSSKRFDDAANTRTLGGYTVLNLVASTQITRDIGLVARVDNVGDKDYTLARGYA
TGGRNAYIGLKWTPQ
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcttcaactgccggccgtcgcgcatgcccagcaggatgcgccggcactcggc
gaaaccgtggtcaccgccaaccgcacgccgcagccgctgtcggacctcgtgggcgacgtg
tccgtggtcgaccgccagaccatcgagcgcagcggcgcggtcggcgtggccgacgtgctg
gcgcgcctgcccggcatcgagatcacgcgcaacggcagcgtgggcaacaccaccagcctg
tacatccgcggcgccgagacccgcttcacggccgtctacgtcgacggcgtgcgcgtcgat
tcgcaatcgaccggcggtgccggctgggaaagcattccgctctcgcagatcgaccgcatc
gaagtgctgcgcggcccggccgccgcggtgtacggctccgatgccgtgggcggcgtgatc
cagctcttcaccaggcgcggcgaagaaggcgtggcgccttacgcgggcatcggcttcggc
agccacggcctgcgcaaggcggaggcgggcgtgagcggcaagtcgggcgccttcgactat
tcgctgggcgcggcgcacgaggaaagccggggcttcaacgtgctgccgatggacaagcgc
acgccctccaaggacggcttcaccagccccgaccgcgacggctaccgcagcaattccggc
aacctgcgcctgggctaccagctcacgccgaaccagcggctggaagccacgctgctgtac
agcgacatggaagccggctacgacccgccggtgagcttcaggaccaagccgccgatcctc
ttccggaacgacatctcgaacaacacgctgcgcacggccgggctctcgtggtcggccaag
tggaacgacatctacagcacgcgcgtgcaggtcaccgattcgcagtcggtctacaagacc
cagccttcgttctaccgcaccgaaaccaatctgcgcggctacctgttccagaacgaattc
cgcttcggcccgcacctggtgacggccacgctcgagcgccgcgaagacgcgctcgagaat
gcgcccaccatcagcagcggcctgctctcgagcaagcgctcgcaggacgcggtctcgctc
ggctatggcttcgtgcagggcgcgcattcgctccagctgcatgtgcgccatgacgacgac
agcgaattcggcggcaaggccaccggcagcgccgcctacggctacgcgatcacgccgcgc
ctgcgcgccaccgtctcggccggcaccgccttccgcgcgcccacgctctaccagcgcttc
agcgaatacggcgtggccagcctcaagcccgagtcgagccgcaacgtcgaactcggcctg
cagtacaccgacggcggcacgcatgcgggcatcgtcgtctaccagaaccgcgtcgagaac
ctgatcgtgttcgacggttcggccaccaactgccgctccggcttcggctgctatgccagc
accgcgcgcgcccgctaccagggcgtgacgctgtcgggcgggcaccgcatcggtgacgtg
agcctgcgcgcatcgctcgacttccaggacccgcgcgacctcgacaccgaccacctgctg
gcccgccgcgcgcgccgccacggcacgctgggcgccgactggcgcattgccggctggacg
ctgggcgccgagctgcaatcgtcgagcaagcgcttcgacgacgcggccaacacccgcacg
ctgggcggctacaccgtgctgaacctggtggccagcacgcagatcacgcgcgacatcggc
ctggtggcccgcgtcgacaatgtgggcgacaaggactacacgcttgcacgcggctacgcc
accggcggccgcaacgcatacatcggcctgaagtggacaccgcaataa
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