Variovorax paradoxus S110: Vapar_2617
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Entry
Vapar_2617 CDS
T00916
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00220
Arginine biosynthesis
vap00240
Pyrimidine metabolism
vap00250
Alanine, aspartate and glutamate metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
vap01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Vapar_2617
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Vapar_2617
00220 Arginine biosynthesis
Vapar_2617
Enzymes [BR:
vap01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Vapar_2617
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATPgrasp_Ter
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_3
ATP-grasp_5
Pus10_C
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ACS19242
UniProt:
C5CKT8
LinkDB
All DBs
Position
1:2760819..2764067
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AA seq
1082 aa
AA seq
DB search
MPKRSDLQSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPAT
ADVTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWRHGVLDKYTGAATNKPV
ELIGATPEAIDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWAVQKSVGFPTVIRPSFT
LGGTGGGIAYNPEEFETICKRGIEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIVCS
IENLDPMGVHTGDSITVAPAQTLSDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDG
RMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSID
YVVTKIPRFAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLNEKT
QDREVLEKELGEPGPERIWYVGDAFAMGLSVDEVFALTKIDPWFLVQIEEIVKIELELET
KSLADIDRDTLLALKKKGFSDRRLAKQLKTTDTAVREKRRALGVRPVYKRVDTCAAEFAT
NTAYMYSTYEDECEADPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMV
NCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPLGVIVQYGGQTPLKLALDLEANGV
PIIGTSPDMIDAAEDRERFQKLLHELGLRQPPNATARTEPEALEKAAALGYPLVVRPSYV
LGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAVECDVDCIRDAEGQTLIGGV
MEHIEQAGVHSGDSACSLPPYSLSAETIAELKRQSAAMAAALNVVGLMNVQFAIQQKDGK
DVIYVLEVNPRASRTVPYVSKATGIQLAKVAARCMAGQSLKSQGVTKEVTPPYFSVKEAV
FPFVKFPGVDTILGPEMKSTGEVMGVGRTFGEAFVKSQLGAGTLLPKSGKVFISVKNNDK
ARAVEVARGLVKLGFEIIATKGTAAAIGAAGIECATVNKVTEGRPHIVDMIKNNEIALVI
NTVEERRNAINDSRQIRTSALLARVTTFTTIFGAEAAVEGMGFMDELGVISVQEMHAQLA
AA
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgctcagacctccaatccattctcatcatcggcgccggcccgatcatcatc
ggccaggcctgcgagttcgactactccggcgtgcaggcttgcaaggcactgcgcgaggag
ggctacaaggtcatcctgatcaacagcaaccccgccacgatcatgaccgacccggccacg
gccgacgtgacctacatcgagccgatcacctggcagacggtcgagaagatcatcgccaag
gagcgccccgacgcgatcctgccgaccatgggcggccagacggcgctgaactgcgcgctc
gacctctggcgtcacggcgtgctcgacaagtacaccggcgcggccaccaacaagccggtc
gaactgatcggcgccacgcccgaagccatcgacaaggccgaggaccgcctgaagttcaag
gacgcgatgaccaagatcggcctcggctcggcgcgctccggcatcgcccactcgatggac
gaagcctgggccgtgcagaagtcggtcggcttcccgacggtgatccgccccagcttcacg
ctcggcggcaccggcggcggcatcgcctacaacccggaagagttcgagaccatctgcaag
cgcggcatcgaagcctcgccgaccaacgagctgctgatcgaagagtcgctgctcggctgg
aaagagtatgagatggaagtcgtgcgcgacaaggccgacaactgcatcatcgtctgctcg
atcgagaacctcgaccccatgggcgtgcacaccggcgactcgatcaccgtggcccctgcg
cagacgctctccgacaaggaataccagatcctgcgcaacgcctcgctggccgtgctgcgc
gagatcggcgtcgataccggcggctcgaacgtgcagttctcgatcaacccgaaggacggc
cgcatggtcgtcatcgagatgaatccgcgcgtgtcgcgttcgtcggcgctggcctccaag
gccacgggcttcccgatcgccaaggtcgcggccaagctggccgtgggctacacgctcgac
gagctgcgcaacgaaatcacgggcggcgccacgcccgcgtcgttcgagccgtcgatcgac
tacgtggtcaccaagatcccgcgcttcgctttcgagaaattcccgcaggccgattcgcgc
ctgaccacgcagatgaagtcggtgggcgaggtgatggccatgggccgcaccttccaggag
tcgttccagaaggcgctgcgcggcctcgaagtgggcgtggacggcctcaacgagaagacg
caggaccgcgaagtgctcgagaaggaactgggcgagcccggccctgagcgcatctggtac
gtgggcgatgccttcgccatgggcctgagcgtcgatgaagtgttcgcgctgaccaagatc
gacccgtggttcctggtgcagatcgaggagatcgtgaagatcgagctcgagctcgaaacc
aagtcgctggccgacatcgaccgcgacacgctgctcgcgctcaagaagaagggcttctcg
gaccgccgactcgccaagcagctcaagaccaccgacacggccgtgcgcgaaaagcgccgc
gccctcggcgtgcgcccggtctacaagcgcgtggatacctgcgcggccgagttcgcgacc
aacacggcctacatgtactcgacctacgaggacgagtgcgaagccgatcccaccgacaag
aagaagatcatggtgctcggcggcggccccaaccgcatcggccaaggcatcgagttcgac
tactgctgcgtgcatgccgcgctcgcgatgcgcgaggacggctacgagaccatcatggtc
aactgcaaccccgagaccgtgtcgaccgactacgacacctccgaccgcctgtacttcgag
ccgctcacgctcgaggacgtgctcgagatcgtcgacaaggaaaagccgctcggcgtgatc
gtgcagtacggcggccagacgccgctgaagctcgcgctcgacctcgaggccaacggcgtg
ccgatcatcggcacctcgcccgacatgatcgacgcggccgaagaccgcgagcgcttccag
aagctgctgcacgagctgggcctgcgccagccgccgaacgccacggcgcgcaccgagccc
gaggcgctcgaaaaggccgcggcgctgggctatccgctggtggtgcgcccgagctacgtg
ctcggcggccgcgcgatggaaatcgtgcacgagcagcgcgacctcgagcgctacatgcgc
gaggcggtgaaggtcagcaacgattcgccggtgctgctcgaccgcttcctcaacgacgcc
gtcgaatgcgacgtcgactgcatccgcgacgccgagggccagaccctgatcggcggcgtg
atggagcacatcgaacaggccggcgtgcactcgggcgactccgcctgctcgctgccgccc
tacagcctgagcgccgaaaccattgccgaactgaagcgccagagcgccgcgatggccgcc
gcgctcaacgtggtgggcctgatgaacgtgcagttcgcgatccagcagaaggacggcaag
gacgtcatctacgtgctcgaagtgaacccgcgggcttcgcgcaccgtgccctacgtgagc
aaggccaccggcatccagctcgccaaggtggcggcgcgctgcatggccggccagtcgctc
aagtcgcagggcgtgaccaaggaagtcacgccgccgtacttcagcgtgaaggaagccgtg
ttcccgttcgtcaagttccctggcgtggacaccatcctcggccccgagatgaagtcgacc
ggcgaagtcatgggcgtgggcaggaccttcggcgaggccttcgtgaagtcgcagctcggt
gccggcacgctgctgccgaagtcgggcaaggtcttcatctcggtgaagaacaacgacaag
gcgcgcgccgtggaagtggcgcgcggcctggtcaagctgggcttcgagatcatcgcgacc
aagggcacggccgccgccatcggtgccgcgggcattgaatgcgcgacggtgaacaaggtg
accgagggccgcccgcacatcgtggacatgatcaagaacaacgagattgcgctggtcatc
aacacggtggaagagcgccgcaacgcgatcaacgattcgcgccagatccgcacctcggcg
ctgctggcccgcgtgaccaccttcaccacgatcttcggcgccgaagccgcggtcgagggc
atgggcttcatggacgagctcggcgtgatctcggtgcaggagatgcacgcgcagctggct
gccgcctga
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