Variovorax paradoxus S110: Vapar_2668
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Entry
Vapar_2668 CDS
T00916
Name
(GenBank) protein of unknown function DUF853 NPT hydrolase putative
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vap03400
]
Vapar_2668
DNA repair and recombination proteins [BR:
vap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Vapar_2668
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_10
TrwB_AAD_bind
T2SSE
ResIII
AAA_7
AAA_16
SLFN-g3_helicase
AAA_19
AAA
AAA_6
AAA_28
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACS19293
UniProt:
C5CLN6
LinkDB
All DBs
Position
1:complement(2811564..2813078)
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AA seq
504 aa
AA seq
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MADPLLIARHDTIECTLLPSLANRHGLITGATGTGKTVTLQTMAEKLSGIGVPVFMADVK
GDLTGMSQKGSIGEKMAATLKERGIDLPESQACPVTLWDVFGEQGHPVRATVSDMGPLLL
GRMLDVNETQAGVLNLVFKIADDNGLLLLDLKDLRAMLQYVGENASQFTTEYGNISAASV
GAIQRGLLQIETQGGDKFFGEPMLNIADFMQTVGGKGVVNILAADKLMNSPRLYATFLLW
MLSELFEQLPEIGDPEQPKLAFFFDEAHLLFNEAPKALVERIELVVRLVRSKGVGVYFVT
QNPLDIPDSVLAQLGNRVQHALRAFTPRDQKAVKATATTMRQKPGLDIETAITELAVGEA
LVSFLDAKGRPSVTERVFVVPPGSQIGPITAAQRQAVIANSLVAGVYEKTVDRESAYEKL
KGRAETAPDAPQPKTAGAGKGAAEASEGSSMLNDLLFGSTGPRGGKRDGLVQTMAKSAVR
TMGTSVGKEILRGVLGGIFGAKKR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccccttctgatcgcgcgccacgacaccatcgagtgcaccctgctgcccagc
ctggccaaccgccacggcctcatcaccggcgccaccggcaccggcaagacggtcacgctg
cagaccatggccgaaaagctctcgggcatcggcgttcccgtgttcatggccgacgtcaag
ggcgacctgaccggcatgagccagaaaggcagcatcggcgaaaaaatggcggccacgctg
aaggaacggggcatcgatctgcccgaatcgcaggcctgccccgtcaccctgtgggacgtg
ttcggcgaacagggccacccggtgcgcgccaccgtctccgacatggggcccctgctgctg
ggccgcatgctcgacgtgaacgaaacgcaggccggcgtgctgaacctggtgttcaagatc
gccgacgacaacggcctgctgctgctcgacctgaaggacctgcgcgccatgctgcagtac
gtgggcgagaacgcgagccagttcaccaccgagtacggcaacatcagcgccgccagcgtg
ggcgccatccagcgcggcctgctgcagatcgagacccagggcggcgacaagttcttcggc
gagccgatgctcaacatcgccgacttcatgcagacggtgggcggcaagggcgtggtcaac
atcctggcggccgacaagctcatgaattcgccgcggctctacgccacctttctgctctgg
atgctgtccgaactgttcgaacagctgcccgagatcggcgaccccgagcagcccaagctc
gccttcttcttcgacgaggcccacctgctcttcaacgaggcgcccaaggcgctggtcgag
cgcatcgagctcgtggtgcggctggtgcgctccaagggcgtgggggtttatttcgtgacg
cagaacccgctggacattccggattcggtgctggcccagctgggcaaccgcgtgcagcat
gcgctgcgcgccttcaccccgcgcgaccagaaggccgtcaaggccacggccaccaccatg
cgccagaagccgggactggacatcgaaaccgcgatcaccgagctcgcggtgggcgaggcg
ctggtgagttttctcgatgccaagggccgcccgagcgtgaccgagcgcgtgttcgtggtg
ccacccggcagccagatcggccccatcacggccgcgcagcgccaggcggtcattgccaat
tcgctcgtcgctggcgtgtacgagaagaccgtggaccgcgaatcggcctacgaaaaactc
aagggccgggccgaaaccgcgcccgatgcaccgcagcccaagacggcgggcgccggcaag
ggtgcggccgaagcgtccgaaggcagcagcatgctgaacgacctgctcttcggcagcacg
ggcccgcgcggcggcaagcgcgacggcctcgtgcagaccatggccaagtcggcggtgcgg
accatgggcacctcggtcggcaaggaaatcctgcgcggcgtgctgggcggcatcttcggc
gccaagaagcgctga
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