Variovorax paradoxus S110: Vapar_2729
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Entry
Vapar_2729 CDS
T00916
Name
(GenBank) permease YjgP/YjgQ family protein
KO
K07091
lipopolysaccharide export system permease protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_2729
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_2729
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
Vapar_2729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
ACS19351
UniProt:
C5CLU4
LinkDB
All DBs
Position
1:complement(2876625..2877764)
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AA seq
379 aa
AA seq
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MLFHSSLRKELSRSFGATLVVLVTIVMTMMLIRTLGLASKGSVNPSEVFLVMAYTVLGYM
PTILSLSLFIAIVGTLSRMYRDSEMVIWFSSGRGLADFVEPLFRFAWPVLVLIAVMALLG
WPWANSQTIGMRAQYEGRSDIERVTPGEFRESSGRMRVFFIDKDTPDGATATNVFIWAVE
RGLQITTSARSGRIENVGNNRFLMLSNGQRLERPLLPTAGLKISEFETYGTRAGGTSDFS
ADNTPARAKPTLQLLREPGDASHGELAWRIGMLLAAINFVLLALTVSSVNPRVGRSGNLL
FALFAFVVYYNMLNLGQSWISSGRFSMGSFMLLLHGGVLLIGVAWLLLRNNNWGRRRRTE
HVMAGGLPPSPPSKIDPTS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgttattccattcttccctacgcaaggagctgtcgcgcagcttcggagcgaccctcgtg
gtcctggtcaccatcgtgatgaccatgatgctcatccgcacgctcgggctcgcctccaag
ggcagcgtgaacccgtccgaagtgttcctcgtgatggcgtacacggtgctcggctacatg
ccgaccatcctgagcctgagcctgttcatcgccattgtcggcaccttgtcgcgcatgtac
cgcgacagcgagatggtgatctggttttccagcggacggggcctggccgatttcgtcgag
ccgctgttccgcttcgcctggccggtgctggtgctgatcgcggtgatggcgctgctgggc
tggccgtgggccaactcgcagaccatcggcatgcgggcgcaatatgaagggcgcagcgac
atcgagcgggtcacgccgggcgaattccgcgaatcgtccgggcgcatgcgggtcttcttc
atcgacaaggacacgccggatggcgccacggccaccaacgtgttcatctgggcggtcgag
cgcggcctgcagatcacgacctcggcgcgcagcggacgcatcgagaacgtcggcaacaac
cgcttcctgatgctgagcaacgggcagcggctggagcggccgctgctgcccaccgcgggg
ctcaagatcagcgaattcgagacctatggcacccgggccggcggcacctccgacttctcc
gcggacaacacgccggcgcgcgccaagcccacgctccaactgctgcgcgagcccggcgac
gccagccacggcgagctggcctggcgcatcggcatgctgctggcggccatcaatttcgtg
ctgctggcgctgacggtgtcgagcgtcaacccgcgcgtggggcgaagcggcaacctgctg
ttcgcgctgttcgccttcgtcgtctactacaacatgctcaacctgggccagagctggatc
agctccgggcgcttcagcatgggctcgttcatgctgctgctgcacggcggcgtcctgctg
atcggcgtggcatggctgctcctgcgcaacaacaactggggccgcaggcgcaggaccgag
cacgtcatggccggcggcctgccgccttcgccgccctcgaaaatcgacccgacctcgtga
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