Variovorax paradoxus S110: Vapar_2738
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Entry
Vapar_2738 CDS
T00916
Name
(GenBank) Lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00330
Arginine and proline metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Vapar_2738
Enzymes [BR:
vap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
Vapar_2738
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
Beta_elim_lyase
WHH
Motif
Other DBs
NCBI-ProteinID:
ACS19360
UniProt:
C5CLV3
LinkDB
All DBs
Position
1:2884229..2886532
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AA seq
767 aa
AA seq
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MKFRFPIVIIDEDFRSENTSGLGIRALAQAIETEGFEVLGVTSYGDLSQFAQQQSRASAF
ILSIDDEEFTVGPDLDPAVLSLRNFIGEVRRKNADVPIYIYGETKTSRHIPNDILRELHG
FIHMFEDTPEFVARHIIREAKSYLEGVQPPFFKALIDYAEDGSYSWHCPGHSGGVAFLKS
PVGQMFHQFFGENMLRADVCNAVEELGQLLDHTGPVAASERNAARIFNADHCFFVTNGTS
TSNKMVWHHTVAPDDVVVVDRNCHKSILHAIIMTGAIPVFMKPTRNHFGIIGPIPKSEFE
QSAIKAKIKANPLLADVDPNKVKPRVMTLTQSTYDGVIYNTETIKNMLDGYVDTLHFDEA
WLPHAAFHPFYGAYHAMGKRRVRPKESLVFATQSTHKLLAGISQASHVLVQDSQNRALDR
DLFNEAYLMHSSTSPQYAIIASCDVAAAMMEPPGGTALVEESILEALDFRRAMRKVEDEF
GKDEWWFKVWGPEKLVDEGIGRAEDWIMTGEKNGKQSKSKKSPRNWHGFGELADGFNMLD
PIKSTIVTPGLDLEGNFADTGIPASVVTKFLAEHGVIVEKTGLYSFFIMFTIGITKGRWN
TLLTALQQFKDDYARNQPMWRILPEFCQQHPGYERLGLRDLCQHIHQLYARYDVARLTTE
MYLSDLTPAMKPSDAFAHIAHRKTERVEIDELEGRITTSLITPYPPGIPLLIPGEVFNKK
IVDYLRFSREFNSQCPGFETDIHGLVARIDETGKKRYYADCVAAPKK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcgcttccccatcgtcatcatcgacgaggacttccgctccgaaaacacttcg
ggcctcggcattcgcgcgctcgcgcaggccatcgagacggagggcttcgaggtgctgggc
gtcacgagctacggggacctgagccagttcgcgcagcagcaaagccgcgccagcgccttc
atcctgtcgatcgacgacgaggaattcacggtcggccccgacctcgaccccgcggtgctg
agcctgcgcaacttcatcggcgaggtgcggcgcaagaacgccgacgtgccgatctacatc
tacggcgaaaccaagacctcgcgccacattcccaacgacatcctgcgcgagctgcacggc
ttcatccacatgttcgaggacacgccggagttcgtggcgcgccacatcatccgcgaggcc
aagagctacctcgaaggcgtgcagccgccgttcttcaaggcgctgatcgactacgccgaa
gacggctcgtactcgtggcactgcccgggccattcgggcggcgtggcgttcctgaagagc
cccgtgggccagatgttccaccagttcttcggcgagaacatgctgcgcgccgacgtctgc
aacgcggtggaagaactcggccagctgctcgaccacaccggcccggtggcggccagcgag
cgcaatgcggcgcgcatcttcaacgccgaccattgcttcttcgtgaccaacggcaccagc
accagcaacaagatggtctggcaccacacggtggcgcccgacgacgtggtggtggtcgac
cgcaactgccacaagtcgatcctgcacgcgatcatcatgaccggcgcgatcccggtgttc
atgaagcccacgcgcaaccacttcggcatcatcggaccgattccgaagagcgagttcgag
cagagcgccatcaaggccaagatcaaggccaacccgctcttggccgacgtggaccccaac
aaggtcaagccgcgcgtgatgacgctcacgcagtcgacctacgacggcgtgatctacaac
accgagaccatcaagaacatgctcgacggctacgtcgacacgctgcacttcgacgaggcc
tggctgccgcatgcggccttccacccgttctatggcgcctaccacgcgatgggcaagcgc
cgcgtgcggccgaaggagtcgctcgtgtttgccacgcagtcgacccacaagctgctcgcg
ggcatcagccaggccagccacgtgctggtgcaggactcgcagaaccgtgcgctcgaccgc
gacctgttcaacgaggcctacctgatgcactcgtcgaccagcccgcagtacgcgatcatc
gcgagctgcgacgtggccgccgccatgatggagccgcccggcggcactgcgctggtggaa
gaaagcatcctggaggcgctcgacttccgccgcgccatgcgcaaggtggaagacgaattc
ggcaaggacgagtggtggttcaaggtctggggccccgagaagctcgtcgacgaaggcatc
ggccgcgccgaagactggatcatgacgggcgagaagaacggcaagcagagcaagagcaag
aagtcgccgcgcaactggcacggcttcggcgagctggccgacggcttcaacatgctcgac
ccgatcaagtcgaccatcgtgaccccgggcctcgacctcgaaggcaactttgccgacacc
ggcattcccgcgagcgtggtgaccaagttcctggccgagcatggcgtgatcgtggagaag
accggcctgtacagcttcttcatcatgttcaccatcggcatcaccaagggccgctggaac
acgctgctcacggcgctgcagcagttcaaggacgactacgcgcgcaaccagccgatgtgg
cgcatcctgccggagttctgccagcagcatcccggctacgagcgcctgggcctgcgcgac
ctgtgccagcacatccaccagctctacgcacgctacgacgtggcgcgcctgacgaccgag
atgtacctgagcgacctcacgccggccatgaagccgagcgacgccttcgcccacattgcg
caccgcaagaccgagcgcgtggagatcgacgaactcgaaggccgcatcaccacgagcctg
atcacgccgtacccgccgggcattccgctcctgattccgggcgaggtcttcaacaagaag
atcgtcgactacctccggttctcgcgcgagttcaactcgcagtgcccgggcttcgagacc
gacatccacggcctggtggcgcgcatcgacgaaaccggcaagaagcgctactacgcggac
tgcgtggccgcgccgaagaagtag
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