Variovorax paradoxus S110: Vapar_2747
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Entry
Vapar_2747 CDS
T00916
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vap03021
]
Vapar_2747
03009 Ribosome biogenesis [BR:
vap03009
]
Vapar_2747
Transcription machinery [BR:
vap03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Vapar_2747
Ribosome biogenesis [BR:
vap03009
]
Prokaryotic type
rRNA transcription factors
Vapar_2747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_1
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ACS19369
UniProt:
C5CLW2
LinkDB
All DBs
Position
1:2895844..2897328
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AA seq
494 aa
AA seq
DB search
MNREMLMLVDAISREKNVERDVVFGAVESALAQATKKLHQGDVDIRVSVDRDSGDYETFR
RWHVVPDEAGLQLPDQEILLFEAKEEMPDIEVGEYIEEAVDSVPIGRIGAMAAKQVILQK
IRDAEREMLLNDFMSRGDKIFVGTVKRLDKGDIIVEAGRVEGRLRRSEMIAKENLRNGDR
VRAMIMEVDLTLRGAPIILSRSAPEFMIELFRQEVPEIEQGLLEIKSCARDPGSRAKIAV
LSHDKRVDPIGTCVGVRGTRVNAVTNELAGERVDIVLWSEDPAQFVIGALAPANVSSIVV
DEEKHAMDVVVDEENLAIAIGRGGQNVRLASDLTGWKINIMDANESAQKQASETDASRKL
FMEKLDVDEEIADILISEGFNSLEEVAYVPISEMLEIEAFDEDTINELRSRAKDALLTME
IAKEEGVETVSQNLRDLEGLDPELIPKLAEAGVHTRDDLADLAVDELTEITGHSADDAKA
LILKAREHWFAGQE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcgaaatgttgatgttggtggatgcgatctcgcgcgagaagaacgtcgagcgc
gacgtggttttcggcgcggtcgagtccgcgctggcgcaagccaccaagaagctccaccag
ggcgacgtggacatccgcgtctcggtcgaccgcgacagcggcgactacgaaaccttccgc
cgctggcacgtcgtccccgacgaagccggcctgcagctgcccgaccaggaaatcctcctg
ttcgaagccaaggaagaaatgcccgacatcgaggtcggcgagtacatcgaggaagcggtg
gactcggtgccgatcggccgcatcggcgccatggcggccaagcaggtcatcctgcagaag
atccgcgacgccgagcgcgagatgctgctcaacgacttcatgtcgcgcggcgacaagatc
ttcgtgggcaccgtcaagcgactggacaagggcgacatcatcgtggaggccggccgcgtc
gaagggcgcctgcgccgcagcgagatgatcgccaaggaaaacctgcgcaacggcgaccgc
gtgcgggccatgatcatggaagtcgacctgacgctgcgcggcgcgccgatcatcctgtcg
cgctcggcgcccgagttcatgatcgagctgttccgccaggaagtgcccgagatcgaacag
ggcctgctcgaaatcaagagctgcgcccgcgaccccggttcgcgcgccaagatcgccgtg
ctctcgcacgacaagcgtgtcgacccgatcggcacctgcgtcggcgtgcgcggcacccgc
gtcaatgccgtgaccaacgagctcgccggcgagcgcgtggacatcgtgctgtggagcgaa
gacccggcccagttcgtgatcggcgccctggccccggccaacgtgtcgtcgatcgtggtc
gatgaagaaaagcacgccatggacgtggtggtcgacgaggaaaacctcgccatcgccatc
ggccgcggcggccagaacgtgaggctcgcctccgatctgaccggctggaagatcaacatc
atggacgccaatgaatcggcccagaagcaggcgagcgaaaccgacgccagccgcaagctg
ttcatggaaaagctcgacgtcgacgaggaaatcgccgacatcctgatctccgagggcttc
aacagcctcgaggaagtcgcctatgtgccgatctccgaaatgctggagatcgaagccttc
gacgaagacaccatcaacgagcttcgttcgcgcgccaaggatgcgctgttgaccatggaa
atcgccaaggaagagggcgtcgagaccgtctcgcagaatctgcgcgacctcgaaggcctc
gaccccgagctgattcccaagctggccgaggcgggtgtgcacacccgcgacgacctcgcc
gacctcgcggtcgatgaactcaccgagatcaccggccacagcgccgatgacgccaaagcc
ctcatcttgaaagcccgcgaacattggttcgccggccaagagtga
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