Variovorax paradoxus S110: Vapar_2857
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Entry
Vapar_2857 CDS
T00916
Name
(GenBank) DNA-directed DNA polymerase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap03030
DNA replication
vap03430
Mismatch repair
vap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Vapar_2857
03430 Mismatch repair
Vapar_2857
03440 Homologous recombination
Vapar_2857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vap03032
]
Vapar_2857
03400 DNA repair and recombination proteins [BR:
vap03400
]
Vapar_2857
Enzymes [BR:
vap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Vapar_2857
DNA replication proteins [BR:
vap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Vapar_2857
DNA repair and recombination proteins [BR:
vap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Vapar_2857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
ACS19477
UniProt:
C5CMW5
LinkDB
All DBs
Position
1:complement(3002433..3003455)
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AA seq
340 aa
AA seq
DB search
MSTPALSPWLHRPLAELLRQRGHAWLLQGPSGLGQYELALALAAAWLCEQPNKEEGGTAC
GHCPSCHAIEVRTHADLCVLMPEVAMQELGWPLDEKAQADIDDKKRKPSREIRVEAMRDA
VGFAQRTSARGRGKVVLVYPAERMNTITANALLKTLEEPVGDVRFVLASEAAWQLLPTIR
SRCLGFTLPWPETAEAEAWLAAQDVPAGDATALLRAAGGRPSDALRLARSGQSPKAWSLL
PKAVSRGDVAALADQSPSQAIGSLQKLCHDLMAVGSGAAPRFFEAADLPPAVPSHLALAR
WSKSLANAARTAEHPFNAGLMLEALVSEARTTLNSAARRP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcccgcgctctcgccctggctgcatcgcccgctcgcggaactgctgcgccag
cgcggccatgcctggctgctgcaggggccttcgggcctgggccaatacgaactcgcgctc
gcgcttgccgcggcctggctgtgcgaacagcccaacaaggaggagggcggcaccgcctgc
ggccattgcccgagctgccatgcgatcgaggtgcgcacccatgccgacctttgcgtgctg
atgcccgaagtggccatgcaggaactgggctggccgctcgacgaaaaggcgcaggccgac
atcgacgacaagaagcgcaagcccagccgcgagatccgcgtcgaagccatgcgcgacgcc
gtcggctttgcccagcgcaccagcgcccgcgggcgcggcaaggtggtgctggtgtatccg
gccgagcgcatgaacaccatcacggccaatgcgctgctcaagacgctggaggagccggtc
ggcgatgtgcgcttcgtgctggccagcgaggcggcctggcagttgctgccgaccatccgc
agccgctgcctgggcttcacgctgccctggcccgagacggccgaggccgaagcctggctg
gccgcgcaggacgtgcccgccggggatgccactgcgttgctgcgcgccgccggcgggcgc
cccagcgatgccttgcggcttgcgcgctccggccagtcgcccaaggcctggtcgctcttg
cccaaggccgtttcgcgcggcgacgtggctgcgcttgcggaccagtcgccctcgcaggcc
atcggctcgctgcagaagctctgccacgacctgatggccgttggcagcggcgccgcgccg
cgtttcttcgaggccgccgacctgccgcccgccgtgccttcgcacctggcgctggcacgc
tggtcgaagtcgctcgcgaacgcggccaggaccgccgaacaccccttcaatgcgggcctc
atgctggaagcgcttgtgagcgaagcgcgaaccaccctaaactctgcagctcgccgccca
tga
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