Variovorax paradoxus S110: Vapar_2875
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Entry
Vapar_2875 CDS
T00916
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Vapar_2875
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GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
DUF460
T2SSK
HHH_6
Motif
Other DBs
NCBI-ProteinID:
ACS19495
UniProt:
C5CMY3
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Position
1:complement(3021316..3023691)
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AA seq
791 aa
AA seq
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MQKIIRQLAAEIKVGEHQVKAAIELLDGGATVPFIARYRKEVTDGLDDIQLRELEARLSY
LRELEDRRAAVLKSIDEQGKLTPELRAAIEFAPTKQELEDLYLPFKQKRRTKGQIAREFG
IEPLADKLLADPTLDPAVEAKAFLQPATTLDDGKPGPDFSTVPAVLDGVRDILSERWAED
AALVQSLREWLWNEGLLKSTLMAGKDENNADIAKFRDYFDYDEPIGRVPSHRALAVFRGR
ALDILDAKLVLPVEPEPGKPSVAEGRIALHLGWSHAGRAADDLLRKCVAWTWRVKLALST
ERDLFTRLREEAEKVAIKVFADNLRDLLLAAPAGPRVVMGLDPGIRTGVKVAVVDATGKL
VETATVFPHEPRKDWEGSLHTLGKLCAKHGVNLIAIGNGTASRETDKLAADLIKLLAKMA
AQAGAPEMKVDKVVVSEAGASVYSASEFASQEMPDVDVSLRGAASIARRLQDPLAELVKI
DPKSIGVGQYQHDVNQSELARTLQAVVEDCVNSVGVDLNTASVPLLSRVSGLSASVAKAV
VRWREANGAFSTRKQLLDVSGFGPKAFEQSAGFLRIRGGADPLDVTGVHPETYPLVEQII
VKTGKPIAELMGRAEMLKTLKPELFVNEKFGVITVKDILGELEKPGRDPRPDFKVARFND
GVDDIKDLVEGMILEGTVSNVAQFGAFIDLGVHQDGLVHVSQLSHKFVNDAREVVKTGDI
VKVKVMEVDVARKRIGLSMKLDAAPARRDGPRDNRFEGAGRGQQQGPRRDNSPQPAGQMA
SAFAKLQGLRK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcattcgccagctcgccgccgagatcaaggtaggcgagcaccaggtgaag
gcggccatcgaactgctcgatggcggtgccacggttccgttcattgcccgctaccgcaag
gaagtgaccgacggcctcgacgacatccagctgcgcgaactcgaggcgcgcctttcgtac
ctgcgcgaactcgaagaccgccgcgccgcggtgttgaagagcatcgacgagcagggcaag
ctcacgcccgagctgcgcgccgccatcgaattcgcgccgactaagcaggagctcgaggac
ctgtacctgccgttcaagcagaagcgccgcaccaagggccagatcgcgcgcgagttcggc
atcgagccgctcgccgacaagctgttggccgaccccacgctcgaccccgccgtggaagcc
aaggccttcctgcagcccgccaccacgctcgacgatggcaagccgggccccgatttctcg
accgttccagccgtgctcgacggcgtgcgcgacatcctttccgaacgctgggccgaggat
gcagcgctggtgcagagcctgcgcgaatggctctggaacgaaggcctgctcaagtccacg
ctgatggctggcaaggacgagaacaacgccgacatcgccaagttccgcgactacttcgac
tacgacgagcccatcggccgcgtgccttcgcaccgcgcgctggcggtgttccgcggccgc
gcgctcgacatcctcgacgccaagctggtgctgccggtggagcccgagccgggcaagccc
agcgtcgccgaaggccgcatcgcgctgcacctgggctggagccacgccggccgcgcggcc
gacgacctgctgcgcaagtgcgtggcctggacctggcgcgtgaagctcgcgctttccacc
gagcgcgacctgttcacccgcctgcgcgaagaggccgagaaggtggcgatcaaggtgttt
gccgacaacctgcgcgacctgctgctggccgcaccggccggcccgcgcgtcgtgatgggg
ctggaccccggcatccgcaccggcgtgaaggtggccgtggtcgatgccaccggcaagctg
gtcgagaccgccaccgtgttcccgcacgagccgcgcaaggattgggaaggctcgctgcac
acgctcggcaagctgtgcgccaagcatggcgtgaacctgatcgcgatcggcaacggcacc
gccagccgcgagaccgacaagctggccgccgacctcatcaagctgctggccaagatggcc
gcgcaggccggcgcgcccgagatgaaggtcgacaaggtggtggtgagcgaggccggtgct
tccgtctattcggccagcgaattcgcctcgcaggaaatgcccgacgtggacgtgagcctg
cgcggcgcagcgagcattgcgcgccgcctgcaggacccgctggccgagctcgtgaagatc
gaccccaagagcatcggcgtgggccagtaccagcacgacgtgaaccagagcgaactcgcg
cgcacgctgcaggccgtggtggaagactgcgtgaattcggtgggcgtggacctcaacacc
gcgagcgtgccgctgctgagccgcgtctcgggcctgtcggccagcgtggccaaggcggtg
gtgcgctggcgcgaagccaacggcgcgttctccacgcgcaagcagctgctcgacgtgagc
ggcttcggccccaaggccttcgagcagagcgcgggcttcctgcgcatccgcggcggcgcc
gacccgctcgacgtgaccggcgtgcaccccgaaacctatccgctggtcgagcagatcatc
gtcaagaccggcaagccgatcgccgagctgatgggccgcgccgagatgctcaagaccctg
aagcccgagctgttcgtgaacgaaaagttcggcgtcatcacggtcaaggacatcctgggc
gaactcgagaagcccggccgcgacccgcgcccggacttcaaggtggcgcgcttcaacgac
ggcgtggacgacatcaaggacctggtcgagggcatgatcctcgaaggcaccgtgagcaac
gtggcgcagttcggcgccttcatcgacctgggcgtgcaccaggacggcctggtgcacgtg
agccagctgagccacaagttcgtgaacgatgcgcgcgaggtcgtgaagaccggcgacatc
gtcaaggtgaaggtgatggaagtggacgtggcgcgcaagcgcatcggcctgtcgatgaag
ctcgacgcagcgcccgcccgccgcgacggcccgcgcgacaaccgcttcgaaggcgcaggc
cgcggccagcagcagggcccgcgccgcgacaactcgccgcagccggcggggcagatggcg
agtgcgtttgcgaagctgcaggggttgcgcaagtag
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