Variovorax paradoxus S110: Vapar_2876
Help
Entry
Vapar_2876 CDS
T00916
Name
(GenBank) GntR domain protein
KO
K13637
GntR family transcriptional regulator, uxu operon transcriptional repressor
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_2876
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Vapar_2876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_Crp_2
HTH_11
HTH_41
Fe_dep_repress
TrmB
Rrf2
HTH_DeoR
Motif
Other DBs
NCBI-ProteinID:
ACS19496
UniProt:
C5CMY4
LinkDB
All DBs
Position
1:3023878..3024615
Genome browser
AA seq
245 aa
AA seq
DB search
MALKLIHPSSEAMSKIGQPPMEKPYQRLAANIHELVKQGEFLVGQRLPSERALAERFDVS
RTSVREAIIALELQGVVEVRGGSGIYICQPQDAPTRLPVVQETGAGPFELLRARCLIESE
IASLAATTRKDADLDKMFGALATMREQMHDKEANEAADRMYHLHIAESTGNSVLLQTVTN
LWDQAKGPIWTQIEQHFHSPALRLQSQDDHQRIFAAIVSGDAEAARLAMRAHLERVIGEF
AQSWR
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggccctcaagctcattcacccatcctccgaagcgatgtcgaaaatcggccaacctcca
atggagaagccgtaccagcgcctggctgccaatatccatgaattggtcaaacagggtgag
tttctggtcggccagcggctgccctccgaacgggcgctggcggagcgcttcgacgtgagc
cgcacctcggtgcgcgaggccatcattgcgctggagctgcagggcgtggtcgaggtgcgc
ggcggatccggcatctacatctgccagccgcaggacgcgcccacgcggctgccggtggtg
caggaaaccggtgccggccccttcgagctgctgcgcgcgcgctgcctgatcgagtccgag
atcgcctcgctggcggccaccacgcgcaaggacgccgacctcgacaagatgttcggcgcg
ctcgccaccatgcgcgagcagatgcacgacaaggaagccaacgaggcggccgaccgcatg
taccacctgcacattgccgaatccaccggcaacagcgtgctgctgcagacggtgacgaat
ctctgggaccaggccaagggcccgatctggacgcagatcgagcagcacttccattcgccc
gcactgcgcctccagtcgcaagacgaccaccagcgcatctttgccgcgatcgtctcgggc
gatgccgaggccgcgcggctggccatgcgggcgcacctggaacgcgtgatcggcgagttc
gcccagagctggcgctag
DBGET
integrated database retrieval system
