Variovorax paradoxus S110: Vapar_2925
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Entry
Vapar_2925 CDS
T00916
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00071
Fatty acid degradation
vap00362
Benzoate degradation
vap00650
Butanoate metabolism
vap01100
Metabolic pathways
vap01120
Microbial metabolism in diverse environments
vap01200
Carbon metabolism
vap01212
Fatty acid metabolism
Module
vap_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Vapar_2925
09103 Lipid metabolism
00071 Fatty acid degradation
Vapar_2925
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Vapar_2925
Enzymes [BR:
vap01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Vapar_2925
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Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
Semialdhyde_dh
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
ACS19545
LinkDB
All DBs
Position
1:complement(3075426..3077531)
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AA seq
701 aa
AA seq
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MTAEYKVLGDVAVITMTNPPVNGLGFSTRIGITDGLAKANADDAVKAIVITGAGKAFSGG
ADIKEFGTPKALQEPNLLSVILALEASPKPIVAAIHSVCMGGGLELALGCHYRVAAPGTS
IALPEVKLGLIPGAGGTQRLPRVLGVETALNMIVSGESVKSELLAGLPGQKLFDKLAASP
ESVFEEALAFAKSVAGKTGDALPLVRNLPCKHPQGDAYFQFAKNMVGGMSKNYPAPLKCV
DAVQAATKMKFDEGMAEERRIFTALMFTPESLALRHLFMAERAASKIPDVPEDTPKREVK
SVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGIATIKKNYESQVKKGKLKQDKY
EQRMALLSTTLDYNDLKDADLIIEAVFEELGVKEKVFKELDRVAKKGAILASNTSTLDVD
KIAAFTQRPQDVVGMHFFSPANVMKLLEVVRGKATSKDVLATVMDIGKKIKKTAVVSGVC
DGFIGNRMIEQYSRQAGFLLDEGATPQQVDKAVEKFGFAMGPFRMGDLAGNDIGWAIRKR
RAVEHPDMKYSRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSELVNKMIEDHRKELGI
TPRKISDEEIVQRLVYALVNEGAHILEDGIASKSGDIDMVYLTGYGFPVWRGGPMHYASQ
VGLYNVAETMKRFAKNPRDDAEFWQPAPLIQKLVAEGKQFS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgaatacaaagtgctcggcgatgtcgccgtgatcacaatgaccaaccctccg
gtcaacggtctcggtttctcgacccgcatcggcatcaccgatgggctcgcgaaggccaat
gccgacgacgccgtcaaggccatcgtcatcaccggcgccggcaaggcgttctcgggcggt
gcggacatcaaggaattcggcacgcccaaggcgctgcaggagcccaacctgctgagcgtg
atccttgcgctcgaggcttcgcccaagccgatcgtcgcggcgatccactcggtgtgcatg
ggcggcggcctcgagctggcgctcggctgccactaccgcgtggcggcgcccggcaccagc
attgcgctgcccgaggtcaagctgggtctgattcccggcgccggcggcacgcagcgcctg
ccgcgcgtgctgggcgtggagaccgcgctcaacatgatcgtgagcggcgagtccgtcaag
agcgaactgctcgccggcctgccgggccagaagctgttcgacaagctcgcggcctcgccc
gaatcggtgttcgaggaagcccttgcattcgccaagagcgtggcgggcaagaccggcgac
gcgctgccgctggtgcgcaacctgccgtgcaagcacccgcagggcgatgcctacttccag
ttcgcgaagaacatggtcggcggcatgtcgaagaactacccggcgccgctcaagtgcgtc
gacgccgttcaggctgccaccaagatgaagttcgacgaaggcatggccgaggagcgccgg
atcttcaccgcgctgatgttcacgcccgaatcgctggcgctgcgccacctgttcatggcc
gagcgcgcggcctccaagattccagacgtgcccgaggacacgcccaagcgcgaagtcaag
tcggtgggcgtgatcggcgccggcaccatgggcggcggcatctcgatgaactttttgaac
gcgggcattcccgtgaagattctcgagatgaagcaggaagcgctcgaccgcggcattgcc
accatcaagaagaactacgaatcgcaggtcaagaagggcaagctcaagcaggacaagtac
gagcagcgcatggcgctgttgagcaccacgctcgactacaacgacctgaaggatgccgac
ctgatcatcgaagccgtgttcgaggaactcggcgtgaaggagaaggtgttcaaggaactc
gaccgcgtggccaagaagggcgcgatcctggcttccaacacctcgacgctcgacgtcgac
aagatcgcagccttcacccagcgcccgcaggacgtggtcggcatgcacttcttcagcccg
gccaacgtgatgaagctgctcgaagtggtgcgcggcaaggccacgtccaaggacgtgctg
gccacggtgatggacattggcaagaagatcaagaagacggccgtggtctcgggcgtgtgc
gacggcttcatcggcaaccgcatgatcgagcagtactcgcgccaggccggcttcctgctg
gacgagggcgccacgccgcagcaggtcgacaaggccgtcgagaagttcggctttgcgatg
ggcccgttccgcatgggcgacctggctggcaacgacatcggctgggccatccgcaagcgc
cgggccgtggagcatccggacatgaagtacagccgcacggccgacaagctctgcgaactg
ggccgcttcggccagaagaccggggcagggtggtacgactaccaggccggcaagcgcgat
gcgattccgtcggagctcgtcaacaagatgatcgaggaccaccgcaaggaactgggcatc
acgccgcgcaagatttccgatgaagagatcgtgcagcgcctggtgtatgcgctggtcaac
gaaggcgcgcacatcctggaggacggcattgcctcgaagtcgggcgacatcgacatggtg
tacctcaccggctacggcttcccggtctggcgcggcggcccgatgcactacgcgtcgcag
gtgggcctgtacaacgtggccgaaaccatgaagcgctttgccaagaacccgcgcgacgat
gccgagttctggcagcctgcgccgctgatccagaagctggtggccgaaggcaagcagttc
agctga
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